Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02438 ATGATAGTCAAAATATATCATCAAATGGGAGATATTGTCAAGCTTCCTCCTGGCTTTGTTTTCTCTCCATCAGATGAAGAACTTATCATCCACTTTCTATATTCCAAGGCTTCTGATCTTATACCATCCCACTCAAACTTCATCCCTCATCTTGATCTTTCTCTATTGCTTCCTTGGGAATTAAATGGTAAGGCTATGTGTGGTGGAAATGATGAAGACCAATACTATTTCTTCACAAAACTGAAAAAGGAAAACAGATCCACTAAAAATGGGTTTTGGAAGGAAATTGGTGTGACAGAACCAATATTTTCAGGTACTGATCAAAAAGTGGGAATGAAAAACTACCTAGTATTCAACATTTCACAAGGTGCTGAAACTAGTTGGGTAATGCAAGAATATCACATTTGCTCCAATGTGTTTGATAAAGTTGGTGAAAATTGGAACGAGTGGGTGTTATGCAAAGTGTATGAAGTTGAAAAGAACATGTATCCTGAACAAGGTTACAGCGATGATGATCGTGAGAGTAGTGGTACAGAACTTTCATGGCAAGACCAAGTTTTTCTGTCTTTGGACTTGGACATGGACATGGAAGGAGGAATAAGCATGAATTAG 612 0.3742 MIVKIYHQMGDIVKLPPGFVFSPSDEELIIHFLYSKASDLIPSHSNFIPHLDLSLLLPWELNGKAMCGGNDEDQYYFFTKLKKENRSTKNGFWKEIGVTEPIFSGTDQKVGMKNYLVFNISQGAETSWVMQEYHICSNVFDKVGENWNEWVLCKVYEVEKNMYPEQGYSDDDRESSGTELSWQDQVFLSLDLDMDMEGGISMN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02438 203 Pfam No apical meristem (NAM) protein 16 135 IPR003441 GO:0003677|GO:0006355
Vivi3g02438 203 ProSiteProfiles NAC domain profile. 15 158 IPR003441 GO:0003677|GO:0006355
Vivi3g02438 203 SUPERFAMILY NAC domain 6 156 IPR036093 GO:0003677|GO:0006355
Vivi3g02438 203 Gene3D NAC domain 24 162 IPR036093 GO:0003677|GO:0006355
Vivi3g02438 203 PANTHER NAC TRANSCRIPTION FACTOR 56 15 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02438 Vivi-Chr3 41005868 41007246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02438 15 164 NAC Transcription Factor Family AT1G61110 34.302 2.16e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi3g02438 NAM 3.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02438 - - vvo:131638416 412.149