Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02437 ATGAAGAAACAATGGTGTGAGATTGAGGCAATAGGCATTAACTATAAGATCCATAGCACAAAGACAATAAAACAGCCTTTTAAAATCTTCAACAAACCTCTAAAACCAGACGATGAAGCAAACGCCAGAGAAATGCCGGGTAGTGGAGTTAAGCATGTTCTCAAGGATGTTAATTGCATGGCCAAGCCATGTGAAATTCTTGCGATAGTTGGGCCAAGTGGAGCAGGAAAATCATCACTGCTGGAGATTCTTGCTGGTAGAGTTAGTCCACAGAATGGAGGTTCTATCTTGGTGAACCAGGAGCATGTAGATAAATCTCAGTTCAGAAAAATTTCAGGGTATGTTACACAAAAGGATACCCTTTTCCCCTTACTTACAGTTGAAGAAACCATGATGTTTAGTGCAAAACTAAGGCTAAATCTTCCTCAAGAAAAACTATGCTCCAAGGTTAAGTCACTGATTCAAGAGCTTGGTCTTAGCCATGTTGCTAGGACTAGAGTAGGAGATGGAGATGACAGAATCCGCGGAATATCTGGTGGCGAGAGGCGTCGAGTTTCTATTGGTGTTGAAGTCATTCATGATCCAAAAGTGTTGATTCTTGATGAAGCAACTTCTGGTCTTGACAGTACCTCAGCTTTGCAAATAATTGATATGCTGAAAGTCATGGCGGAATCTAGGGGAAGAACTATAATACTGAGTATTCATCAACCCGGGTTCAGGATAGTGAAGTTGTTCAATTCAATACTGTTGTTAGACAATGGCAGTGTGTTGCATCATGGGAGTGTGGATTTGTTGGATGTGAATCTGAGATTGATGGGTTTAGAGCTTCCTCTTCATGTTAATGTTGTTGAGTTTGCTATTGAATCCATTGAGACTATTCAGCAACATCAACAAAGTCTGCAAGTTCAGACCGAAGCGCCGAAACGGGTACTCGGGTCGATGATACTAAAGAAAGGAGATGATCAAGGTGAAAGCAGAAGTGGTAAGTTAACTCTACTACAGCTATTTCAACAATCCAAGGTATTTGACATCGAAAACATCAATGTCGGAATGGATTTCACTTGTGATTATGCTAATTCTAGATTGAGAGAAACTATGATTCTTGCTCATAGGTTCTCCAAAAACATTCTACGTACAAATGAGCTCTTTGCATTCAAGACAGTTCAGATGCTGATTTCTGGTCTGGTTTTAGGCTCCATATTTGGTAATCTCAAAGATGGTTTAGTGGGAGCAGAACAGAGAGTTGGTTTATTTGCTTTCATATTAACGTTTTTGTTATCAAGCACTATTGATGCTCTACCGATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAAACATCGAGTGGAAGCTACAGAGTTTCATCCTATGCTTTAGCCAATGGCCTAGTTTACTTGCCATTTCTACTCATACTAGCCATTTTATTCGCAGTGCCGCTGTACTGGATTGTCGGTCTCAACCAAAACTTCACGGCGTTTCTGCACTTTCTGTTGCTAATCTGGCTGATTCTGTATACTGCAAATTCGGTTGTGGTATGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGAAATTCGGTAATTGCCGGTGTCATTGGTTCATCTTTTTTGTTTTCTGGTTACTTCATATCCAATCATGAAATTCCAAAGTACTGGATTTTCATGCATTATTTATCTCTATTTAAGTATCCCTTTGAAGGGTTTCTAATAAATGAGTTCTCCAACTCAAAGAAATGCTTAGAGTACATGTTTGGGGCATGTGTGATGAAGGGAGAGGATATACTCAAAGAAGAAGGGTATGGAGGAGAGAGTAGTAGATGGAAGAATGTTGGGGTGATGGTGTCCTTTATCTTTGCTTATAGATTCATTTCTTATGTAATTCTCAGATACAGATGTTCCCAGCGTGTCATCTTCTGA 1917 0.398 MKKQWCEIEAIGINYKIHSTKTIKQPFKIFNKPLKPDDEANAREMPGSGVKHVLKDVNCMAKPCEILAIVGPSGAGKSSLLEILAGRVSPQNGGSILVNQEHVDKSQFRKISGYVTQKDTLFPLLTVEETMMFSAKLRLNLPQEKLCSKVKSLIQELGLSHVARTRVGDGDDRIRGISGGERRRVSIGVEVIHDPKVLILDEATSGLDSTSALQIIDMLKVMAESRGRTIILSIHQPGFRIVKLFNSILLLDNGSVLHHGSVDLLDVNLRLMGLELPLHVNVVEFAIESIETIQQHQQSLQVQTEAPKRVLGSMILKKGDDQGESRSGKLTLLQLFQQSKVFDIENINVGMDFTCDYANSRLRETMILAHRFSKNILRTNELFAFKTVQMLISGLVLGSIFGNLKDGLVGAEQRVGLFAFILTFLLSSTIDALPIFLQEREILMKETSSGSYRVSSYALANGLVYLPFLLILAILFAVPLYWIVGLNQNFTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSSFLFSGYFISNHEIPKYWIFMHYLSLFKYPFEGFLINEFSNSKKCLEYMFGACVMKGEDILKEEGYGGESSRWKNVGVMVSFIFAYRFISYVILRYRCSQRVIF 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02437 638 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 278 IPR003439 GO:0005524
Vivi3g02437 638 FunFam ABC transporter G family member 5 39 302 - -
Vivi3g02437 638 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524|GO:0016887
Vivi3g02437 638 SMART AAA_5 63 255 IPR003593 GO:0016887
Vivi3g02437 638 Pfam ABC-2 type transporter 365 573 IPR013525 GO:0016020|GO:0140359
Vivi3g02437 638 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 623 - -
Vivi3g02437 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 264 IPR027417 -
Vivi3g02437 638 Gene3D - 43 312 IPR027417 -
Vivi3g02437 638 Pfam ABC transporter 54 205 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02437 Vivi-Chr3 40989938 40992104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02437 59 325 Calmodulin-binding Proteins AT2G36910 24.088 1.14e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02437 K05681 - gmx:121172640 951.429