Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02395 ATGGAGAGTGTTTGTCTCAAGTGTGGCGATGTAGGTTTTATCGAGGCTATAGTTTTTTGCAACAAGTGTGAGGCTTGTGCTCTTCACAGGTACTGTTTAGATGGACCTGTGATTTTTACTGATGAAGTTATATGGTTTTGTGAGGATTGTGAACCAAAGCAAATATCGCAAAAAACTAAATTGGCAAGTTTGGCCAATTACAGAATCCAAACCCGAAGAAAACTGAAACATTGTGTAAAGAGACTGAAGGAAAGAAATCAACAGCACAAAAGGAAGATTAAAGAGAAGGGGAAGAACGGAAAAGTTAAATCTGGCATGCATAATATCAGCCATGAACAAGAAACTGAATCTAAAAATGAGTGTGAACCAGTTCCATCAAATTCACCAAATAGCAACGTTGTTCCTGAATCTATTCAAATCTCTCAAGTTACTGTCACTGATGATTTAATTCCTTTGGAAGTTCATGTTGATGCACAACCGATTGCAGAACCAATATGGAGGGGAAACTTGCTCTTCTGTGATAAAAGTAAAACTACCGGTACTGTCAAACTTCTGGCCCATTTGTCCAGTTTAGCATCCCCCAAAGTTCTGGAGGAGGTTGATCTTTTCCCAGAAGTGCTTTCCGCTGATTTGCTTCCCAGATCTGCGGTGTGGCCTACTAGCTTCAAGAAGAAAGGACCAACTGATAAGAGCATTGCTCTTTATTTCTTTCCTGTAAATGAAAGTGTCTTTGATAAGCTGGTTGATGATATCATTCGGACTGAAGAGGCCGTAAGAGTTGTGACCGAAAATGCAGTGCTTTTAATTTTTCCTTCCACCTTGCTTCCAATCCAACATCAGAGGTTTCAATCCAAACATTACTTGTGGGGTGTCTTCAAGAAAAAGCAAACTTCACTCGAGGCAAATGATGCTGTGAGCTGA 921 0.4007 MESVCLKCGDVGFIEAIVFCNKCEACALHRYCLDGPVIFTDEVIWFCEDCEPKQISQKTKLASLANYRIQTRRKLKHCVKRLKERNQQHKRKIKEKGKNGKVKSGMHNISHEQETESKNECEPVPSNSPNSNVVPESIQISQVTVTDDLIPLEVHVDAQPIAEPIWRGNLLFCDKSKTTGTVKLLAHLSSLASPKVLEEVDLFPEVLSADLLPRSAVWPTSFKKKGPTDKSIALYFFPVNESVFDKLVDDIIRTEEAVRVVTENAVLLIFPSTLLPIQHQRFQSKHYLWGVFKKKQTSLEANDAVS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02395 306 MobiDBLite consensus disorder prediction 85 133 - -
Vivi3g02395 306 PANTHER - 1 134 - -
Vivi3g02395 306 SUPERFAMILY FYVE/PHD zinc finger 2 60 IPR011011 -
Vivi3g02395 306 MobiDBLite consensus disorder prediction 99 119 - -
Vivi3g02395 306 Coils Coil 72 99 - -
Vivi3g02395 306 ProSitePatterns Zinc finger PHD-type signature. 5 50 IPR019786 -
Vivi3g02395 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 76 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02395 Vivi-Chr3 40421758 40424420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02395 2 74 C2H2 Transcription Factor Family AT3G01460 31.507 5.89e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02395 - - mtr:11424150 393.66