Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02288 ATGCACCTCACCATGGCTTCTTCTTCTTCTCGCTCATACCAAACTCATCTCAAAAACACAGAACAAGATTTCAATTTTTTCAAAGATGAAAAATCATCAAAAGCTCTTCAACATGATGATGAAGAAGAAGAAGATTGGCTAAAGTTAGGGTTAGGTTTAGGAACTAGCACATCATCATCATCACCATGGAAGAAAATAGTAGTAAGTCATAATCCAATTTTAGTTTCTCCATCATCATTATCATCTACTTCACAAAAACTTTGCTCCCCTCAAATAGGATTAGGGTTAGGGTTTGAAGATCAAGGTTCAGGTTTTGTATCAAGAAAAGGTAAAGAGGGATTAGAAAACTTGAATTTATCTAATGACCATCATCACCATCATAATGATGATGATAATGGTAAGGTTATAGGGTCATCATCATTATCATTATCATCATCATGTGAAATCATGAATCCTCGTGGTGAAGAAGACTTGGCTATGAAGTTTCCTAGTGATTCTCATCATTACTTGGCCAGAAATAATCACAACCAATCTGGTTTCTGGTTTACCCTACGCTCCTTTACCAACCGGAATGGTGAAGCTTTGCCTCAAATATCAAAGGAATACATAAGAGTAAAGGATGAAAACATGACGGTGTTGATGGTTAAAAAGTATCTGGTTACAAAACTAGGTCTCTCCAATGAAGATGAGATTGACGTCTCTTGCATGGGAGAAAGCTTGTCGCATGTCCAAACTCTGAAGCAAGTAAGAGACACTATTTGGCTCCCAAGATTGGTTGAATATGTAGATTCAACTACTTTGTCACTTGGAGATTTCCATGAGGTGACCATGAACCATTTGATGTCACTAATTTACCAAAAACATTATATATTGAATTGA 879 0.3641 MHLTMASSSSRSYQTHLKNTEQDFNFFKDEKSSKALQHDDEEEEDWLKLGLGLGTSTSSSSPWKKIVVSHNPILVSPSSLSSTSQKLCSPQIGLGLGFEDQGSGFVSRKGKEGLENLNLSNDHHHHHNDDDNGKVIGSSSLSLSSSCEIMNPRGEEDLAMKFPSDSHHYLARNNHNQSGFWFTLRSFTNRNGEALPQISKEYIRVKDENMTVLMVKKYLVTKLGLSNEDEIDVSCMGESLSHVQTLKQVRDTIWLPRLVEYVDSTTLSLGDFHEVTMNHLMSLIYQKHYILN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02288 292 MobiDBLite consensus disorder prediction 116 135 - -
Vivi3g02288 292 MobiDBLite consensus disorder prediction 116 133 - -
Vivi3g02288 292 PANTHER RING FINGER PROTEIN 5 288 IPR044171 GO:0007275
Vivi3g02288 292 Gene3D - 117 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02288 Vivi-Chr3 37648181 37652505 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02288 190 251 C3H Transcription Factor Family AT3G23060 46.032 2.13e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02288 - - vvo:131655432 543.117