Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02287 ATGTCGACTTTTCACGTCGGCGGCAAGGTCGTCGACAGAGTTGATTTGCTGAGGAAGAAGCAATTGTTATGGCGCTTAGACGTTTGGCCTTTCGCCGTTTTCTATGGCGTGTGGCTTTCAATTATTCTTCCCAGTCTTGATTTTGTTGATGCTTGTATTGTGTTAGGGGCACTGTCTTCTACTCATATACTCGTTTGTCTCTTCACTGCTTGGTCGGTTGATTTCAAATGTTTTGCGTATTATAGCAAGGTCAAAAATATTGATCAGGCTGATTCTTGCAAGATAACTCCGGCTAAATTTTGTGGGTCTAAGGAAGTTGTGCCGCTTAATTCTCGGAAATCACCTGCAGGTTCTTCATCAGTGGATCTGGAAGAGATTTACTTTGATTTTAGAAAACAATGTTTTGTTTATTCGAAGGAGAATGGGAATTTTAACAAACTATCGTATCCTACCAAGGAAACATTTGGACATTATCTCAAGTGTAGTGGTCATGGTTCCGAAGCCAAAGTTCTTGCTGCTACCGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAGCCAACATTTCAGAAATTGATGAAAGAACATTGCATGGAACCTTTTTTCGTATTTCAGGTTTTTTGTGTTGGTCTCTGGTGTTTAGATGAATATTGGTACTATAGTTTGTTCACTCTATTTATGCTGTTTATGTTTGAGTCGACCATGGCAAAAAGTCGGTTAAGGACTCTGACTGAGTTAAGACGTGTTAGAGTGGATAATCAGATTGTTATGGTTCATCGTGGTGGCAAATGGGTAAAACTATCTGGTACAGACCTTTTGCCTGGAGATGTTGTCTCTATAGGCCGTTCTTCTGGTCAGAATGGAGAGGAGAAATCTGTACCTGCAGACATGCTTATATTGGCTGGAAGTGCAATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAGATTTCTATTGCGGGTAGGGGTATGGAGGAGAAGTTGTCAGCAAAGCGAGATAAAACCCATGTTTTATATGGTGGAACCAAAATATTGCAGCACTCTCCAGATAAGACCTTTCCTCTAAAAACACCTGATGGTGGCTGCTTGGCTGTTGTCCTTAGAACTGGGTTTGAAACGAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACTGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGACTGTTCATTTTATTCTTGGTTGTATTTGCTTTAATTGCGGCTGGTTATGTGTTTATTAAGGGGCTAGAAGACCCCTCAAGGAGCAAGTATAAACTTATACTAAACTGTTCTCTTATTGTTACTTCTGTGATACCTCCCGAGTTACCAATGGAATTATCTATAGCTGTTAACACTTCTCTGATTGCACTTGCACGTCGAGGAATTTTTTGCACAGAACCTTTTCGGATACCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGGACACTTACATCTGATGACATGGAATTTTCCGGAGTGGTTGGCTTGACAGAAACTACAGATTTGGAATCTGACATGAGTAAAGTGCCTGTGCGAACAGTAGAAATTCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAGCTGGTTGGCGATCCTCTCGAGAAGGCCGCACTCAAGGGAATCGATTGGAGTTATAAATCTGATGAGAAGGCTGTTCCTAAAAGGGGAAATGGGCATCCTGTCCAAATTGTTCAGCGGTACCATTTTGCATCTCACTTAAAACGAATGGCAGTTATTGTTCGTATTCAAGAGGAATTTTTTGCATTTGTGAAGGGGGCCCCAGAAATTATACAAGATAGGCTCATTAATGTGCCTCCATCATATGTTGAGACCTACAGAAAATATACACGCCAGGGGTCTCGTGTTCTTGCTCTGGCTCACAAGTCTCTTCCAGACATGACAGTTAGTGAAGCTAGAAGCTTGGAGAGGGATGTGGTAGAAAGTGGACTTACTTTTGCTGGTTTTGTGGTGTTCAACTGTCCCATAAGATCAGATTCAGCTGATGTTTTATCAGGGTTGAAAGAATCTTCACATGACTTGGTGATGATTACTGGTGACCAAGCTTTGACAGCCTGTCATGTCGCTAGTCAAGTTCATATTATATCAAAACCAACATTAATTCTTACTCCATTGAGTTATGGTAAAGGATATAGTTGGGTGTCTCCCGATGAAAATGAAAACATTCGATACAGTAAGGAAGAGGTGGAAAGTTTGTCAGAGTCTCATGATCTATGTGTTGGAGGTGATTGTTTCGAGATGTTGCAACAAACATCAGCTCATCTTCTGGTCATTCCTTATGTGAAGGTTTTTGCTAGAGTTGCTCCTGAGCAAAAGGAACTTATCTTGACCACTTTCAAAACAGTCGGACGGGTAACATTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTTTGAAGCAGGCACATGTAGGAGTTGCTCTTCTGAATGCAATGCCGCCAGCTAAAGGTGGAAACTCCTCTTCAGATTCAGCAGCCGAAGACAGTTCAAAACCTGCTAAGCAAAAGAAATCCAAGCCTGCAGGTGAAACATCTGGAAAGAGTATTAGCCCAAGTGGAGAAGGCACTTCAAAAGCCAAAGGTGCTTCTAAATCAGACTCCACTAGCCATTCAGCTGGTGACCGTCATCAAACAGCCGTTGATATGCAAAGACAGAAGCTTAAGAAGATGATGGATGAGCTCAATGAAGAAGGAGATGGGCGTGCACCCATTGTCAAGCTTGGTGATGCCTCAATGGCATCCCCGTTTACTGCTAAGCATGCATCTGTTTCTCCCACCACTGACATAATTCGACAAGGTCGGAGTACCCTAGTGACAACCCTTCAAATGTTTAAAATTCTGGGCCTCAACTGTCTTGCTACTGCATATGTCTTGAGTGTTATGTATCTGGATGGTGTCAAGCTAGGTGATGTACAAGCAACAATAAGTGGTGTCTTCACTGCTGCATTCTTCCTCTTTATTTCACATGCACGCCCTCTTCCCACTCTCTCAGCCGAACGTCCCCACCCCAACATCTTCTGTGCTTATGTCTTGCTTTCCCTCTTGGGACAGTTTTCTGTTCACCTGTTTTTTCTTATGGCATCCGTCAAAGAAGCTGAAAGATACATGCCAGAAGAATGTATTGAACCAGATGCAAGTTTTCATCCCAACTTGGTTAATACTGTTTCCTACATGGTGAGCATGATGCTCCAGGTGGCCACATTTGCCGTAAACTACATGGGCCATCCCTTCAACCAAAGTATTTCTGAAAACAGGCCTTTCCGTTATGCCCTCTTTGCTGCTGTTTGTTTCTTTACTGTGATAACATCTGATCTCTTCAGGGATTTGAATGACTGGTTGAAGTTGGTTCCATTGCCAGTTGGTTTGAGGAATAAACTTTTAATTTGGGCTTTTCTGATGTTTTTCATATGCTACTCATGGGAGAGACTGTTGAGGTGGGCTTTTCCCGGTAAAGTCCCAGCTTGGAAGAGGCGACAACAGGTTGCCGTATCTAATTTAGAAAAGAAGAAAGAGCTCTAA 3576 0.4239 MSTFHVGGKVVDRVDLLRKKQLLWRLDVWPFAVFYGVWLSIILPSLDFVDACIVLGALSSTHILVCLFTAWSVDFKCFAYYSKVKNIDQADSCKITPAKFCGSKEVVPLNSRKSPAGSSSVDLEEIYFDFRKQCFVYSKENGNFNKLSYPTKETFGHYLKCSGHGSEAKVLAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLRTLTELRRVRVDNQIVMVHRGGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLILAGSAIVNEAILTGESTPQWKISIAGRGMEEKLSAKRDKTHVLYGGTKILQHSPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVFIKGLEDPSRSKYKLILNCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLTETTDLESDMSKVPVRTVEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDEKAVPKRGNGHPVQIVQRYHFASHLKRMAVIVRIQEEFFAFVKGAPEIIQDRLINVPPSYVETYRKYTRQGSRVLALAHKSLPDMTVSEARSLERDVVESGLTFAGFVVFNCPIRSDSADVLSGLKESSHDLVMITGDQALTACHVASQVHIISKPTLILTPLSYGKGYSWVSPDENENIRYSKEEVESLSESHDLCVGGDCFEMLQQTSAHLLVIPYVKVFARVAPEQKELILTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNAMPPAKGGNSSSDSAAEDSSKPAKQKKSKPAGETSGKSISPSGEGTSKAKGASKSDSTSHSAGDRHQTAVDMQRQKLKKMMDELNEEGDGRAPIVKLGDASMASPFTAKHASVSPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVLLSLLGQFSVHLFFLMASVKEAERYMPEECIEPDASFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENRPFRYALFAAVCFFTVITSDLFRDLNDWLKLVPLPVGLRNKLLIWAFLMFFICYSWERLLRWAFPGKVPAWKRRQQVAVSNLEKKKEL 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02287 1191 ProSitePatterns E1-E2 ATPases phosphorylation site. 489 495 IPR018303 -
Vivi3g02287 1191 Pfam E1-E2 ATPase 255 467 - -
Vivi3g02287 1191 CDD P-type_ATPase_cation 169 1106 IPR047820 -
Vivi3g02287 1191 Gene3D - 482 667 IPR023299 GO:0000166
Vivi3g02287 1191 SUPERFAMILY Calcium ATPase, transmembrane domain M 166 1168 IPR023298 -
Vivi3g02287 1191 MobiDBLite consensus disorder prediction 832 898 - -
Vivi3g02287 1191 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 493 677 IPR023299 GO:0000166
Vivi3g02287 1191 FunFam Cation-transporting ATPase 483 667 - -
Vivi3g02287 1191 NCBIfam P-type ATPase of unknown pump specificity (type V) 39 1148 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Vivi3g02287 1191 PANTHER CATION-TRANSPORTING ATPASE-RELATED 12 1167 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Vivi3g02287 1191 NCBIfam HAD-IC family P-type ATPase 402 515 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi3g02287 1191 SFLD p-type atpase 468 954 IPR044492 -
Vivi3g02287 1191 SUPERFAMILY Calcium ATPase, transduction domain A 254 386 IPR008250 -
Vivi3g02287 1191 Gene3D - 668 846 IPR023214 -
Vivi3g02287 1191 Pfam haloacid dehalogenase-like hydrolase 484 712 - -
Vivi3g02287 1191 Coils Coil 1175 1191 - -
Vivi3g02287 1191 SUPERFAMILY HAD-like 482 835 IPR036412 -
Vivi3g02287 1191 PRINTS P-type cation-transporting ATPase superfamily signature 487 501 - -
Vivi3g02287 1191 PRINTS P-type cation-transporting ATPase superfamily signature 808 827 - -
Vivi3g02287 1191 PRINTS P-type cation-transporting ATPase superfamily signature 307 321 - -
Vivi3g02287 1191 PRINTS P-type cation-transporting ATPase superfamily signature 689 699 - -
Vivi3g02287 1191 Coils Coil 896 916 - -
Vivi3g02287 1191 FunFam Cation-transporting ATPase 225 387 - -
Vivi3g02287 1191 MobiDBLite consensus disorder prediction 861 895 - -
Vivi3g02287 1191 SFLD Haloacid Dehalogenase 468 954 - -
Vivi3g02287 1191 ProSitePatterns Hypothetical cof family signature 2. 808 830 - -
Vivi3g02287 1191 FunFam Cation-transporting ATPase 668 843 - -
Vivi3g02287 1191 Gene3D - 223 387 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02287 1 1191 Primary Pumps ATPases AT5G23630 77.741 0.0 1909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02287 K14950 - gmx:100789385 2130.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02287 3 37601942 37615474 Vivi3g02287 3 37601942 37615474 ECH