Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02286 ATGGATAGGTGGGGTGTTCATCATCGACAGCCATTTATTGGTTGGCATGGGAGAAGTGAGAGTTCTTTTCCTGATGTTACTACCAAGGAAGAGGAATCAGACAATGACGAAGAAGAGGTTGTTATTAAGAATGAACCTGTCTTTTTTCCGGAGTTTAAGAAAAGGAAGCGCCTCAGCCTCAGTCAGCTTAGAGAGGTGAAAGAGGAGTCGTGTGAGAAGCTTAGTCAGCTTAGAGAGGTGAAAGAGGAGTCTTATGGGAAGCTTAGTCAGCTTAGGGAGGTGAAAGAGGAGTATGATGGGAAGGAAAGCGGTAGCAAGAGTAAGAGAAAGAAGCATGATAATAAGGAAAGATGGTCAAGCGAGAGGTACAAGTTAGCTGAGCAAAGCATGTGGGAGGTATTGAAGGCAGAGGGTGCGACTTTTGAAAGCCCAATACCCCGAATGGCGCTAAGAACGTCTGCCCGTAAATTCATTGGTGATACTGGACTTCTAGACCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGAGGGACTGATCGGTTCCGAAGATGGTTCAACACCGACGGAGTCATGGAGTATTGGTTGGAGAGTGCTGATTTGGATGGCGTCCGGCAGGAGGCCGGGGTGCATGATCCCTACTGGATACCACCATCCACTGTTAGGGAAACCCCTGCTGCCCCTTGCAAGGATACTGATTCTTCTGATGAATTGAAACAACTTAAAATGGAAATGGCCCAAATGAAGAAAGATATGCAGGAGCTCGTTGCTGAGAAGAAAAAGAAAAGTGAAAGTAACTTGATGAAGGAGACTTTCAAAGAACTTGTGAAGTGGAAAGCTATAACTGACCATCGCCTAACTGAAATCATGGCTTCTTTTAAGAATTTGCAGGGCAAGTATGGTGAAATGGTGACTTGGAAAACCGAAGTGGAGCAACATCTTATGGACATAACAAATAAGTTGAATGAACTTCAAGCACCAAGAGAATGCACTACTTTTAGCCCTCCTTCAGAAAAATGGAAAGATTGGTTAGAAGCCAGTCACCCATGCAATAATACTCAGGAGGATGCATTGGCAACTTGGATTGGGAGTTCAGAGCTACTTAATGTTCCACAAGAGTGTTTACTTGAATATCCCTACACCGGCATGCCAACTCAGCCACTCAATGAAGAAGCCATTAACAAGAAGAGTGATGCTGAGGAGCTAATGCCCACGATGCAAGATGATCAACCCAATGTCACCCCAGATTCTTCTACAACTGTTAATTCAAAGGCAGACATTGACAACTCATTGATAATGTTTCAGGAGATGTTTATGGATTTATTCAAATGGAAAGAAAAAATGGAGCAGCAGCTGCTGGATGTATCAAACACTGTATATGGCATGCTAGCAATGAAGTAG 1404 0.4395 MDRWGVHHRQPFIGWHGRSESSFPDVTTKEEESDNDEEEVVIKNEPVFFPEFKKRKRLSLSQLREVKEESCEKLSQLREVKEESYGKLSQLREVKEEYDGKESGSKSKRKKHDNKERWSSERYKLAEQSMWEVLKAEGATFESPIPRMALRTSARKFIGDTGLLDHLLKHIDGKVAPGGTDRFRRWFNTDGVMEYWLESADLDGVRQEAGVHDPYWIPPSTVRETPAAPCKDTDSSDELKQLKMEMAQMKKDMQELVAEKKKKSESNLMKETFKELVKWKAITDHRLTEIMASFKNLQGKYGEMVTWKTEVEQHLMDITNKLNELQAPRECTTFSPPSEKWKDWLEASHPCNNTQEDALATWIGSSELLNVPQECLLEYPYTGMPTQPLNEEAINKKSDAEELMPTMQDDQPNVTPDSSTTVNSKADIDNSLIMFQEMFMDLFKWKEKMEQQLLDVSNTVYGMLAMK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02286 467 MobiDBLite consensus disorder prediction 14 39 - -
Vivi3g02286 467 Coils Coil 239 266 - -
Vivi3g02286 467 MobiDBLite consensus disorder prediction 96 119 - -
Vivi3g02286 467 PANTHER PROTEIN DYAD 1 465 IPR044221 GO:0007131|GO:0051177|GO:0051321
Vivi3g02286 467 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02286 Vivi-Chr3 37587503 37591097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02286 117 198 PHD Transcription Factor Family AT5G22260 39.759 4.11e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02286 - - gmx:100806484 630.943