Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02241 ATGTCAAATCAGCAACAACTCCGCCGTGAATCATCCGAGCAACAACTCCGCCGTGAAGCACCTGAGCAACAACACCGCCACCGTGAAGCACCATCCCCAACCACTATCTGTCCGCATAACCAGATGAAATTGCAGGATAAAGACCAATTCGACTCGCCCCAAACCGTTTCTCAATGGCTTCGATCAGTTCGCAAACGCACTTCCAATTCCGGTTTCCCTCGCTCTTCTTCCACCATACCTTTTAGTTTTGGAGAGGATGCAGAAATTGACATGGTTCATGATATTAGTGTGAGGGATAGGCTTGGTAAAGCTGAAATGTTGGACATTGACTCCGGCTCCTTTTCTTGGGACACGCTCTCTTCACTTCACCACATTGAGCACACCAGTAGCAATCAACATTCGGAGGATGAAGTCAATAGATCTCTTGAGATCACAGTAAATTCTGGAGGGGTTGTCTTCTTTGCCCTTTTCAATGTAGATGGGAGCAATGATGCTTCTCCAAAAGAAGCAGCAGCGGTCATAAAGATATCTTCGTCAAGAATGGCAACACAGTCTGAACGACTTGGATATGAATTCGCCAAATGGTTGGGAGTCCAAGCTCCACAGGCTAGAGTCATTCACAATACAAGTTTAGAATGGCTCCAAATTAAGAAAGCTGCCGAAAAGGCAAGGGATGCAGCAAGTTGTGAGAGTAATGTAATTGGTGAAACAACATGTTCTGAACTCTTGGAAGCACTCGAGCTTAGCCGGTGTGTCTTGTTTATGAGTTATGTACATGGCTCACCTTTACTTGAAAGCTCTAGTTCATTTGAATCAAGGGATTCTGCAGAAAGAACGTCTGCAGCGCTTGGTAGGATAATGATGTTAGATCTTGTTATCAGAAATGAAGATAGGCTTCCATGCCGTCAACTTAGATGGCGTGGGAACCCTGCAAATTTGTTATTAACTGAAAAAGCAATCCCTTCACATTTAGATACAATAGGAGAAACCTTTGATTTGGCAATGAACCGATATGAGCCCGGGGTGGTTAGTAGGCTTGAGAAAAAAAAAAGATCTACTTCAAGATCGTGTTCTCATGATAATAGAATAAGAACACAAAGCTCTCACCTTTTACATATAAGAGAATCATCCAATTATACATGCCTTAAAAGTCAAATGTCAAGAGAATCAATATTTACAGGCTTCAACATTGTGGCTATTGACTCTGGTGTTCCACGCCGTCCTCCTGCTGTAAAACGTGTCGCTGATCAAGTCAGCTATCCTAAGTTGGTTGAGTTGGTACTAAATAGTTCTGAGTTTTCTTCTCGCCTGTTACATGATATAACCGGAGGGAAATTAGGAAGTCCTCCCTTAGAAGATATAACTTTAACAATTGATGTACAAGGAAGTGTTGTAACATCAATAGTACAGGAGTTCCGCAGTGGTTTTCGTGCTGCTCTTAGGGATCTGCAAGGATTTCATATATTCTTACTTACACTTCACCAGAAACTTGATAACTTGTTAAGATTGTTTAATAATACTATGAGCAAAGTATCATTGGGGGAGTCTGAAAATGGAGATTCACCTTCACCAACTATTGGTAAGTGCCTCTCTTCAACAAGTAAGGGGAGATTTTCTAATGATAGCCATCGAGATTTTAGTGATTCAGATTCACAAAACTCTGCTCCAAGGGCATTGTCATCCTCAGGCAATAGAAATGTTTGTGACTCTGTTTCTCCTATGTCAAGAGAAGGTTGCCATGGAAAATCCTCCAAAGGGGGTGTGGAGCCATTGCATGATTCCCGTTTTACAGCTAAGCTCCGTGAGTTCCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTAGAACATTGGAATGAAATGCTCAAAAATGATGCTATCAAGTTGTGCCAGGAGAACAATTTTAATTCAGGATTTTTTGAAGGGAGTGATAGCAACACTGTCGTTGATGCATATGAATTGAAGATTAGACTTGAGCATATCCTTGAAAGGATTGCATTGATATCTGAGGCTGCAAATACAGAGAGACCATCTGCTATTACTAATTATTTGTTCATCGGTGGAGTACTATCTGCAAGATCTATACACACAATGCAACACTTAGGAATCACTCATATTTTGTGTTTGTGTACTAACGAAATTGGACAATCAGATTCTCAATTTGCTGATATATTCACTTACAAAAATTTCTCTGTATGTGACACTGAGAATACTAACATCAGCATCTTATTTGACGAAGCTTGTGATTTTATAGAAAATGTTGAAAGAGCGGGCCAGAGAATTCTAGTTCATTGCTTCGAAGGGAAAAGTAGAAGTGTCACAGTAGTCCTGGCTTACTTGATGCTAAGAAAGAACTTGATCAAAAACTGCATGGGAAAGTTTCAATGGAGTGGCGGCAGCGGCGGAGACCAACCATGA 2424 0.4097 MSNQQQLRRESSEQQLRREAPEQQHRHREAPSPTTICPHNQMKLQDKDQFDSPQTVSQWLRSVRKRTSNSGFPRSSSTIPFSFGEDAEIDMVHDISVRDRLGKAEMLDIDSGSFSWDTLSSLHHIEHTSSNQHSEDEVNRSLEITVNSGGVVFFALFNVDGSNDASPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQAPQARVIHNTSLEWLQIKKAAEKARDAASCESNVIGETTCSELLEALELSRCVLFMSYVHGSPLLESSSSFESRDSAERTSAALGRIMMLDLVIRNEDRLPCRQLRWRGNPANLLLTEKAIPSHLDTIGETFDLAMNRYEPGVVSRLEKKKRSTSRSCSHDNRIRTQSSHLLHIRESSNYTCLKSQMSRESIFTGFNIVAIDSGVPRRPPAVKRVADQVSYPKLVELVLNSSEFSSRLLHDITGGKLGSPPLEDITLTIDVQGSVVTSIVQEFRSGFRAALRDLQGFHIFLLTLHQKLDNLLRLFNNTMSKVSLGESENGDSPSPTIGKCLSSTSKGRFSNDSHRDFSDSDSQNSAPRALSSSGNRNVCDSVSPMSREGCHGKSSKGGVEPLHDSRFTAKLREFHKFAKVDAESYKELEHWNEMLKNDAIKLCQENNFNSGFFEGSDSNTVVDAYELKIRLEHILERIALISEAANTERPSAITNYLFIGGVLSARSIHTMQHLGITHILCLCTNEIGQSDSQFADIFTYKNFSVCDTENTNISILFDEACDFIENVERAGQRILVHCFEGKSRSVTVVLAYLMLRKNLIKNCMGKFQWSGGSGGDQP 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02241 807 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 22 788 IPR035010 GO:0004721|GO:0009737|GO:0043622
Vivi3g02241 807 MobiDBLite consensus disorder prediction 512 590 - -
Vivi3g02241 807 Gene3D - 263 514 IPR036940 -
Vivi3g02241 807 MobiDBLite consensus disorder prediction 34 55 - -
Vivi3g02241 807 Gene3D Protein tyrosine phosphatase superfamily 661 791 IPR029021 -
Vivi3g02241 807 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 678 787 IPR029021 -
Vivi3g02241 807 Pfam Actin-fragmin kinase, catalytic 95 333 IPR015275 -
Vivi3g02241 807 ProSiteProfiles Dual specificity protein phosphatase domain profile. 678 807 IPR020422 GO:0006470|GO:0008138
Vivi3g02241 807 MobiDBLite consensus disorder prediction 512 537 - -
Vivi3g02241 807 SMART dsp_5 678 806 IPR020422 GO:0006470|GO:0008138
Vivi3g02241 807 SUPERFAMILY Protein kinase-like (PK-like) 58 418 IPR011009 -
Vivi3g02241 807 CDD DSP 679 788 - -
Vivi3g02241 807 MobiDBLite consensus disorder prediction 551 571 - -
Vivi3g02241 807 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 747 788 IPR000387 GO:0016311|GO:0016791
Vivi3g02241 807 MobiDBLite consensus disorder prediction 1 55 - -
Vivi3g02241 807 Pfam Dual specificity phosphatase, catalytic domain 693 788 IPR000340 GO:0008138|GO:0016311
Vivi3g02241 807 MobiDBLite consensus disorder prediction 11 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02241 Vivi-Chr3 36872913 36877903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02241 25 788 Protein tyrosine phosphatase (PTP) family AT5G23720 57.305 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02241 K14165 - gmx:102661225 993.801