Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02235 ATGTCAAATGAGCCACAAAACCAGGATAAAGAGCAATTCGAGTCTGAAGGACCATCGCCCCTAACCGTTGCTTCCCGGGTTTTTAATTGGCTTCAATCGGTTAGAAAACGTACTTCCAATTACCGCTCCTCCGGTTTCCCTCGCTCTTCTTCCGTACCCTTTTGCGTGTGGGATAGGCTTGGTAAAGCTGAAATGTTGGACATTGAATCGAATTCCTTTTCTTGGGACATGCTCTCTTCACTTCACCATACTGAGCACACCAGTAGCAATGAGCATTCTGAAGATGAAATGAATAGAGCTCTTGAGATGACAGTAAATTCTGGAGGGGTTGTCTTCTTTGCCCTTTTCAATGTCGTGAGCGATGATGCTTCTCCAAAAGAAGCAGCAGCGGTCATAAAGATATCTTCGTCAAGAATGGCAACACAGTCTGAACGACTTGGATATGAATTCGCCAAATGGTTGGGAGTCCAAGCTCCACAGGCTAGAGTCATTCACAATACCAGTACAGAATGGCTCCAAATAAGGGAAGCGGCAGAAAAAGCAAGGGATGCAGCAAGTTGTGAGAGTGATGTTATTGGTGAAACGACCTGTTCGGAACTTTTGGAAGCACTAGAGCTTAGTCGGTGTCTCTTGTTTATGAGTTATGTACATGGCTCACCTTTACTTGAAAGCTCTAGCGCGTTTGAATCAAGGGATTCTGCAGAAAGAACGTCAGCCGCGCTTGGCAGGGTAATGATGCTAGATCTTGTTATTAGAAATGAAGATAGACTCCCATGCCCTCAACTTAGATGGCGTGGGAACCCTGCCAATTTGTTATTGGCTGAAAAAGCAATCCCTTCAAATTTAGATACAAAAGAAGAAAGTGTTGATTTGGTAATGAACCGGTCCAGGGTAGTTGGGACGCTGCAGAAAAAGAAAAGGTCCACTTCAAGATCATGTTCTCATAATAATGAAATAAGATCACAAGGCTCTCCTCTTTCACATATAAGAGAATCATCTGATGACATGTGCCTTAAAAGTCAAACGTCTACTGGCTCCAACATTGTGGCTATTGACTCTGGTGTTCCTCGTCGACCTCCTGCTATAAAACGTGCAGATGATCAGGTAAGTTATCCTAAGTTGGTTGAGTTAGTACTGAATAGCTCTGAGTTTTCCTCTTGCCTCTTACATGATATAACCGGAGGGAAATTAGGAAGTCCTCCCTTAGAAGACATAAATTTAACCCTTGACATACAAGGGACTGATGTAACATCAATAGTTCACGAGTTCCGTTGTGGTTTTCGTGCTGCTCTTAGGGATCTGCAAGGATTTCATATATTCCTACTTACACTCCATCAAAAACTTGATAACTTGTTACGATCATTTAATAATACTATAAGCAAAATATCACTGGGGGAGTCTGAAAAGGAAGATTCTCCTTCACCTGCTACTGGTTGTTGTCTCTCTCCAACAAGAAAAGAGAGATTTTCTAATGATAGCCATCAAGATTTTAGTGATTCAGATTCACAGAGATCTGCTCCAAGGGCATTGTCATCTTCAGGCAATAGGAATTTTTGCGACTCGGCTTCTCCTATGTCAAGAGAAGGTTGCCATGGAAAATCCTCCAAAGGGAGTCTGGAGCCATTGCACGATTCTCATTTTACAGCTAAGCTTCGAGACTTCCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTGGAACACTGGAATGAAATGCTTAAAAGTGATGCTATCAAGTTATGCCAGGAGAACAATTTCAATTCAGGATTTTTTGAGGGAAGTGATAGCAACACTGTTGTTGATGCATATGAATTGAAGATCAGACTTGAGCATATCCTTGAAAGGATTGCATTGATATCTGAGGCTGCAAATACAGAGAGACCTTCTGCTATTACAAATTGTTTGTTCATCGGTGGTGCGCTATCTGCAAGATCTATATACACAATGCAACACTTGGGAATCACTCATATCTTGTGTTTGTGTACTAATGAAATTGGACAATCAGATTCTCAATTTCCGGATCTTTTCACCTACAAAAATTTCTTTGTATGTGACACTGAGAATTCTAACATCAGCCTCTTATTTGAAGAAGCTTGTGATTTTATAGAAGATGTCGAGAGAACAGGTCAGGGAATTCTAGTTCATTGTTTCGAAGGAAAAAGCAGAAGTGTCACTGTAGTCCTTGCTTACTTGATGCTAAGAAAGAGTTTCACATTACTAGAAGCATGGAATGCTATGAAAAAAGTTCACCGTCGAGCACAGCCGAACGACGGTTTTGGAAAGATTTTACAGGAACTGGATCAAAAACTCCATGGGAAGGTTTCAATGGAGTGGCGGAGGCGGAGACCAACAATGAAAGTTTGTCCTATATGTGGTAAGAATGCTGGACTTAGTAGCAGCTCACTTAAGCTCCATCTTCAGAAATCACATAAAAGACTATCATCCGGAAGTGTAGATAGTGCCATGACAATGGAAATCCAAAAGGCATTAACCACTTTGAATATTAGCCGTGGCGGGAGTGTGAGCCCAACACACAGGCTATCTCATTCAATGACAGATTAA 2568 0.4143 MSNEPQNQDKEQFESEGPSPLTVASRVFNWLQSVRKRTSNYRSSGFPRSSSVPFCVWDRLGKAEMLDIESNSFSWDMLSSLHHTEHTSSNEHSEDEMNRALEMTVNSGGVVFFALFNVVSDDASPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQAPQARVIHNTSTEWLQIREAAEKARDAASCESDVIGETTCSELLEALELSRCLLFMSYVHGSPLLESSSAFESRDSAERTSAALGRVMMLDLVIRNEDRLPCPQLRWRGNPANLLLAEKAIPSNLDTKEESVDLVMNRSRVVGTLQKKKRSTSRSCSHNNEIRSQGSPLSHIRESSDDMCLKSQTSTGSNIVAIDSGVPRRPPAIKRADDQVSYPKLVELVLNSSEFSSCLLHDITGGKLGSPPLEDINLTLDIQGTDVTSIVHEFRCGFRAALRDLQGFHIFLLTLHQKLDNLLRSFNNTISKISLGESEKEDSPSPATGCCLSPTRKERFSNDSHQDFSDSDSQRSAPRALSSSGNRNFCDSASPMSREGCHGKSSKGSLEPLHDSHFTAKLRDFHKFAKVDAESYKELEHWNEMLKSDAIKLCQENNFNSGFFEGSDSNTVVDAYELKIRLEHILERIALISEAANTERPSAITNCLFIGGALSARSIYTMQHLGITHILCLCTNEIGQSDSQFPDLFTYKNFFVCDTENSNISLLFEEACDFIEDVERTGQGILVHCFEGKSRSVTVVLAYLMLRKSFTLLEAWNAMKKVHRRAQPNDGFGKILQELDQKLHGKVSMEWRRRRPTMKVCPICGKNAGLSSSSLKLHLQKSHKRLSSGSVDSAMTMEIQKALTTLNISRGGSVSPTHRLSHSMTD 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02235 855 MobiDBLite consensus disorder prediction 1 20 - -
Vivi3g02235 855 MobiDBLite consensus disorder prediction 502 522 - -
Vivi3g02235 855 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 53 854 IPR035010 GO:0004721|GO:0009737|GO:0043622
Vivi3g02235 855 FunFam Dual specificity protein phosphatase PHS1 601 775 - -
Vivi3g02235 855 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 698 750 IPR000387 GO:0016311|GO:0016791
Vivi3g02235 855 Pfam Dual specificity phosphatase, catalytic domain 640 769 IPR000340 GO:0008138|GO:0016311
Vivi3g02235 855 MobiDBLite consensus disorder prediction 487 501 - -
Vivi3g02235 855 SMART dsp_5 629 771 IPR020422 GO:0006470|GO:0008138
Vivi3g02235 855 MobiDBLite consensus disorder prediction 314 329 - -
Vivi3g02235 855 ProSiteProfiles Dual specificity protein phosphatase domain profile. 629 774 IPR020422 GO:0006470|GO:0008138
Vivi3g02235 855 CDD DSP 630 767 - -
Vivi3g02235 855 MobiDBLite consensus disorder prediction 1 19 - -
Vivi3g02235 855 MobiDBLite consensus disorder prediction 305 329 - -
Vivi3g02235 855 SUPERFAMILY Protein kinase-like (PK-like) 34 368 IPR011009 -
Vivi3g02235 855 Gene3D Protein tyrosine phosphatase superfamily 612 783 IPR029021 -
Vivi3g02235 855 MobiDBLite consensus disorder prediction 465 537 - -
Vivi3g02235 855 Pfam Actin-fragmin kinase, catalytic 57 292 IPR015275 -
Vivi3g02235 855 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 629 774 IPR029021 -
Vivi3g02235 855 Gene3D - 221 465 IPR036940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02235 Vivi-Chr3 36861537 36867324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02235 14 840 Protein tyrosine phosphatase (PTP) family AT5G23720 59.239 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02235 K14165 - gmx:102661225 1170.22