Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02201 ATGGGTGATATAAAAGGAAAATGTAAGAAGAATATGATATTGAAGAAATGGCAATCATTTGGAGATGGAGGTGGCAATAGCAATATGAGGTCACTAATATTGAATAAGGGAACTTCAAAATCATTTTTAGAAAACATCCCCAAAGGTTGTTTTTCAGTTTATGTTGGATCTGAAAGACAAAGGTTTATTGTGAAGACCAAGTTTGTTTCACACCCATTATTCAAGATGTTACTAGATGAAGCAGAAGTGGAATTTGGGTTTCAAAATGATGGTCCAATTAGGCTACCATGTAAGGTTGATTTGTTCTATAAAGTTTTGGCTGAAATGAATAATTTTGGTATGGAGGATAAGATTAATGATGGTGTTTGTAGAAGGTTTAACAAGGCTAAAAGGTTTTCATTGTTTTGTTCTTCCAAGCCTAAGCTATATGAATAG 435 0.331 MGDIKGKCKKNMILKKWQSFGDGGGNSNMRSLILNKGTSKSFLENIPKGCFSVYVGSERQRFIVKTKFVSHPLFKMLLDEAEVEFGFQNDGPIRLPCKVDLFYKVLAEMNNFGMEDKINDGVCRRFNKAKRFSLFCSSKPKLYE 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02201 144 Pfam Auxin responsive protein 38 107 IPR003676 GO:0009733
Vivi3g02201 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02201 Vivi-Chr3 36256094 36256683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02201 4 116 Calmodulin-binding Proteins AT3G43120 32.609 1.03e-19 78.6