Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02179 ATGGAATGTTCCGAAGATGGTGCCTTAAGGGTGAAAAAGATGGCAGAGAAGAGGTTTTTACAGGATAACTTTGGGGTTGCAAAACTACTTGCAACGAAGGCTCGGTCCCTGAATCCCAATATTGATGGCATCAATGAACTTCTGGCTACCATTGATGTGTATATAGCTGCTGAAAAAAAAGTTGGGGCAGATGTAAATTGGTACGAGGTACTTGGGGCACAGCCCTTGGATGATGATGATACAATTCGGAGATGTTACAGGCAGAAGGCTCTTACTCTGCATCCGGATAAAAACAAGTCGGTGGGTGCAGACGGTGCATTTAAGCTGGTCTCTCAGGCTTGGACTGTATTATCTGATAAAACTAAGAGAGCCGCCTTTGATCAGAAGTGCCACTTATGGGAGTCCTTCAAAAGGATTAGTGGTGGTATACCTCAGAATAGTTTGTTTGATACTGTTAACCTTGGTGGGAAACCGTCTGAGCCTGCTACTCGTGGTGGTTTGTTTAATGCTGCTAACCGGAAGGACAGAGATCTCACGAGTGGCGCTCATGCCAATCCTACTCCAAGACCTCCTGTATCTGCTCGATATAATAGTTTGTTTAATTCTGCTACCGTGAAGGACATAGATCATACGAGTGCTGCTCACACCAATCCTTCTCCAAAAGCCCCTATTGATAAACCGACTTCATTTTGGACTGTGTGCAGTTTCTGCAGGACACATTACGAGTACTTTACTGTTTATAAAAACTGCAATATTGTTTGTGCCGGCTGCAAGAAGCCATTTTTTGCTTCTGAGACACCACCCCCGCCTTTAATTGCTAATGCTTCACCCACTTCAAGAGCTGCTTTGTTGAAGCAGCATAAGTTCAACTCAACCGGATTGGTAAGAAACAACCATGTCTCAAGTAGGACACTGAACTTTGCCGGAAATTCCAGTGGACAGACATCAGTTTCTACTGTTTCTGGGGCTCTTGGTCATTTTAATAGGCCATCTGTGAATTTGAAGAGAAGGCATGAAGATTCGACACCTCTCATGAGTGAGGAGACACATTTAGGGAAAACTCATGTTTTTGAAAGAACTGTTGCAGGTTCAGATTTTCAGCCTTCTTTGAAAAAAAGGTGCCCAGGTGAACATAAAGTTGATAGTGATAGACTAGGCATGGAAGCTGAAATGGCATCAAAAAAAGGAATAAGCTCTACCAATGTGTCTGGGTCTCTGAAGAATAGTTTTGATGCAGGAAAGGTTAGTGCTTCCGGAAATTCCAGACGAAATGGTATTAGGGACATGTCTCAGCAGAATATGAAGAACATCTTGGCAGAAAAGGCTCGGAAGGTGATTTGTAAGAAACTTGATGAGTGGAAGGAGAGTAGTAGAAAGCTTGATGAATGGAAGGCGATTCGTAAGACGCTTGATGAACGGTATCCGTCTTCTACATTAAAGAATACTGGTGCAGAAGTCAAAGTGAAGGAGAAGGAAAAGGCTATTAATGGTGTGAAGCCTGGTCCAAAAGAAATCGTTGTTTCTGAGACCAACAACTCTATCTCTGCTGTTTCAGAGGTGCCTCTTTCTGTCACAATGAGTGTTCCAGATCCAGATTTCCATGACTTTGATGGGGATCGAGTTGAAGACTCTTTTGATGAGAACCAAGTGTGGGCTGTATATGATGATGAAGATGGAATGCCACGCTACTATGCCTTTATCCACAGTGTGATCTCAAAGAATCCATTCCAAATGAAGATAACCTGGCTGAGCTCTAAAACCAATGATGAGTTTGCACCAATAAGGTGGGTCGGTTCTGGCTTTCCAAAAACCACCGGGGATCTTCGACTAGGCAAGCGTGTAATCAGCAGCAATCTGAATTCTTTCTCGCACAGGGTTAAGTGGACAAAAGGTCCAAAAGGAATTTTCCGTATATATCCCAAGAAAGGGGATGTTTGGGCTTTATATCAGAACTGGTCCCCTGATTGGGATGAACTTACTAAAGATAATGTCATACATCAATACGAAATGGTGGAAGTGCTTGACGACTACAGTGAAGAGCACGGTCTAAACGTTGCTCCCCTTTCCAAGGTTGCAGGTTTCAAGACAGTATTCCGCCAGAATGCTGACCCGAGAAAAATCAGGAACATTCCAAGGGAAGAGATGTTTCGCTTTTCACACCAAGTACCTTCATACTTGCTTACCGGAGAAGAAGGTGAAAATGCTCCTAAAGGTTTCTTGGAGCTGGATCCTGCTTCTACACCTATGGAACTTCTTCAGCTCATCACTGATCCTCCAACCCAAGAAAAGGAAATGCCAGTTGAAAATTCTTCAAAAGATGACTTGAAGCACAAGGACAATTCTAGCGCGAGAAACAAGGCGGCTGAAGCACAGGCAGGGAAGGTTTGGCCTGAGAATTTGCTGGTATACAAGCGGAAACGTTTTAAGGTAAAAAGGGATCAGTGA 2445 0.436 MECSEDGALRVKKMAEKRFLQDNFGVAKLLATKARSLNPNIDGINELLATIDVYIAAEKKVGADVNWYEVLGAQPLDDDDTIRRCYRQKALTLHPDKNKSVGADGAFKLVSQAWTVLSDKTKRAAFDQKCHLWESFKRISGGIPQNSLFDTVNLGGKPSEPATRGGLFNAANRKDRDLTSGAHANPTPRPPVSARYNSLFNSATVKDIDHTSAAHTNPSPKAPIDKPTSFWTVCSFCRTHYEYFTVYKNCNIVCAGCKKPFFASETPPPPLIANASPTSRAALLKQHKFNSTGLVRNNHVSSRTLNFAGNSSGQTSVSTVSGALGHFNRPSVNLKRRHEDSTPLMSEETHLGKTHVFERTVAGSDFQPSLKKRCPGEHKVDSDRLGMEAEMASKKGISSTNVSGSLKNSFDAGKVSASGNSRRNGIRDMSQQNMKNILAEKARKVICKKLDEWKESSRKLDEWKAIRKTLDERYPSSTLKNTGAEVKVKEKEKAINGVKPGPKEIVVSETNNSISAVSEVPLSVTMSVPDPDFHDFDGDRVEDSFDENQVWAVYDDEDGMPRYYAFIHSVISKNPFQMKITWLSSKTNDEFAPIRWVGSGFPKTTGDLRLGKRVISSNLNSFSHRVKWTKGPKGIFRIYPKKGDVWALYQNWSPDWDELTKDNVIHQYEMVEVLDDYSEEHGLNVAPLSKVAGFKTVFRQNADPRKIRNIPREEMFRFSHQVPSYLLTGEEGENAPKGFLELDPASTPMELLQLITDPPTQEKEMPVENSSKDDLKHKDNSSARNKAAEAQAGKVWPENLLVYKRKRFKVKRDQ 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02179 814 MobiDBLite consensus disorder prediction 766 784 - -
Vivi3g02179 814 PRINTS DnaJ domain signature 86 101 IPR001623 -
Vivi3g02179 814 PRINTS DnaJ domain signature 68 86 IPR001623 -
Vivi3g02179 814 PRINTS DnaJ domain signature 102 122 IPR001623 -
Vivi3g02179 814 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Vivi3g02179 814 SUPERFAMILY Chaperone J-domain 41 126 IPR036869 -
Vivi3g02179 814 MobiDBLite consensus disorder prediction 758 791 - -
Vivi3g02179 814 Pfam Domain of unknown function (DUF3444) 525 731 IPR024593 -
Vivi3g02179 814 PANTHER BNAC03G44070D PROTEIN 1 748 - -
Vivi3g02179 814 MobiDBLite consensus disorder prediction 159 195 - -
Vivi3g02179 814 CDD DnaJ 66 119 IPR001623 -
Vivi3g02179 814 Pfam DnaJ domain 66 127 IPR001623 -
Vivi3g02179 814 Gene3D DnaJ domain 63 131 IPR036869 -
Vivi3g02179 814 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02179 Vivi-Chr3 35961636 35965611 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02179 15 271 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 28.244 1.93e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02179 - - mtr:11421300 1090.1