Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02081 ATGCCTCATAGAGCAACTTACATTTTCCCGCGTCATTTTCCAGAGCGAGGATTCGATGAATCATCTAAAAAGCTATTAGATCACGAAAAGGACAAAATCGTCAATTCACTAAAATCTGTAACTGAAAGCGACGTTCAAACCAGTAACCAACTTTCGCCGTCTACTCCTCCGTCAAATAAACACGACGTCGTTTTCTCCTCCGGCAAACACTCTAACTCCGACAAGCTCCGAATTAAGCAAAAGCAGATAGCGGCTTTCTGCGACTGGTTTATTGACAAGAAAAGAAATCACTCCGGTTACCAGAATCACCATCTCCGCCGCCGCTCATCGATCTCCGATGACGATCATGATCACGATTTTCTTCTTCATCACCAGGAGAAAGACACTGCGATCGACCGGAATTTTGATCGGCAGGTTTCGCTTCCGAGGCTATCAAGTGATAGTAGTTATGCAGGGAGCTTGTTTTCCAGTGACATTAAGGAGGAAACACCGTTGTCTCAAGTCTCCACCATTACCACCACCACGGCGAAGAGACAGAAGGATGAAGATCAAAACAAAGAGGCGTTGGCTAAGGAGTGTAACGAAAGCTATATCTTGCAGCTTAAGTTAGCAAAGAGGGTAACTTGCTTGGCAAGTCTCGTAACGGAACCTGTTCTTACTCATGGCACTGAAACTTGGGATGCTGAATCTGTTTCTTATCGTCTTTGGGTGAGTGGGTGCTTGTCATACACGGACAAGATAAGTGATGGTTTTTACAACATATTGGGGATGAATCCGTATCTATGGGTGATATGCAATGATGAGGAGGAAGGTAAGAAGATACCTACTTTATTGGCGCTTAAAGCGGTTGAACCAAGCGAGACGTCTATGGAGGTGGTGCTGGTCGATGGGCACCTGGATCCTCGCTTGAAGATGCTTCATGATAAAGCTCAGGAGTTGTATTGTTCTTCCGAGAACACACTGGTGTTTGTTGAACAGCTTGGAAAACTTGTTGCCATATATATGGGGGGTATATTCCCAATTGAGCAAGGAGATCTCCACAAAAGGTGGAGGTTGGTTAGTAAGAGGCTGAAGAATTTTCACAATTGTTTTGTGGTTCCCATTGGCAGTCTATCTTCTGGGCTTTGTAGGCATCGAGCAATTCTCTTCAAGAGATTGGCTGATTACATAGGTTTGCCTTGTCGCATAGCTCGTGGTTGCAAGTATTGTGCTTCAGATCACAGATCCTCTTGCCTAGTCAAGATTAAAGATGACAAGCAGCTCTCGAGGGAATATGTTGTCGACCTAGTTGGGGAACCTGGAAATGTCCACGGCCCAGATTCCTCCATTAACGGAGCATATGTTTCTTCGATTCCTTCACCGTTTCAAATTTCTCATTTTAAGGAATTACAATCACCCTATAAAGATGATGAAACAAGTTCTCAACCACCTATTAATTTCAACCGAAGTTCTTGTAATCCTGAAACAAATCCTTATTCAGGTTGTAGACAGAATGATCAACCAGTTAAAGAAGCGGAATTGTTGAAAGTTCACCAGGGCTCCATCTGTGCTTCAGCTGATCAATCCTGTGAAGGAACCAAACCACTTCTAATTCCTTTTGGTTTAAAAGAGAATGATGAGGAATGTGCAGTTCTAGGTGCAATTTTGCCTACCATTCACGAGGATGTTTCTAAAGTTTTTCCTCCCACCGGAACATCATTACATGAATATCCAAGGCTTAGTGAAGAGGCAGTTGTGTTAGAAGAAAATTCGAGCAATGAAATCATCGTAACCGGATGTTCTGTGGTAAAAAGTACTTTCAAGCAATGTATACTTAGTTCCTCATGCCAATCAGAACTGAAGCAGCTAGACGATAAAATTGAAAACCAAGACTATGTATCTGCTGGGAGTATTCCAAGATATGTGAATCTCGAACCATCATTGGCAATGGACTGGCTTGAGATATCATGGGATGATTTACGCATTAAAGAACGTGTTGGGGCTGGCTCATTTGGAACTGTGCATCGTGCTGAATGGCATGGATCAGATGTTGCAGTCAAGGTTTTAACAGATCAGGATTTTCATGATGATCACTTAAAGGAGTTTCTAAGAGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAACACGCCCCAATCTATCAATAGTGACAGAGTATTTGCCAAGGGGTAGTTTATACCGCCTGATACATAGGCCAGCATCTGGTGAAGTTCTGGATAGTAGGAGAAGATTACGAATGGCTTTGGATGTGGCTAAAGGAATCAATTATCTCCATTGTCTTAAACCTCCAATCGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGACAAAAATTGGACTGTGAAGGTTTGTGATTTTGGGTTGTCCAGATTTAAGGCAAACACTTTCATACCCTCAAAATCTGTTGCCGGAACACCTGAGTGGATGGCCCCAGAATTTCTTCGCGGAGAACCTTCAGATGAGAAATCAGATGTATACAGTTTTGGAGTTATCCTGTGGGAGCTTGTGACCATGCAACAACCATGGAGTGGACTTAGCCCTCCCCAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGGAAGCTTGCTATCCCTCCAAACATCTCCCCAGTATTTGCCTCCCTCATGGAATCTTGTTGGGCTGATGACCCTGCTCAGCGCCCATCTTTTGGTGGCATAATTGTTACCCTAAAGAAGCTGCTGAGGTCTCCAACAGAGATGATAAAAATGGGTGATATGCACAACCCATAA 2781 0.4358 MPHRATYIFPRHFPERGFDESSKKLLDHEKDKIVNSLKSVTESDVQTSNQLSPSTPPSNKHDVVFSSGKHSNSDKLRIKQKQIAAFCDWFIDKKRNHSGYQNHHLRRRSSISDDDHDHDFLLHHQEKDTAIDRNFDRQVSLPRLSSDSSYAGSLFSSDIKEETPLSQVSTITTTTAKRQKDEDQNKEALAKECNESYILQLKLAKRVTCLASLVTEPVLTHGTETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVICNDEEEGKKIPTLLALKAVEPSETSMEVVLVDGHLDPRLKMLHDKAQELYCSSENTLVFVEQLGKLVAIYMGGIFPIEQGDLHKRWRLVSKRLKNFHNCFVVPIGSLSSGLCRHRAILFKRLADYIGLPCRIARGCKYCASDHRSSCLVKIKDDKQLSREYVVDLVGEPGNVHGPDSSINGAYVSSIPSPFQISHFKELQSPYKDDETSSQPPINFNRSSCNPETNPYSGCRQNDQPVKEAELLKVHQGSICASADQSCEGTKPLLIPFGLKENDEECAVLGAILPTIHEDVSKVFPPTGTSLHEYPRLSEEAVVLEENSSNEIIVTGCSVVKSTFKQCILSSSCQSELKQLDDKIENQDYVSAGSIPRYVNLEPSLAMDWLEISWDDLRIKERVGAGSFGTVHRAEWHGSDVAVKVLTDQDFHDDHLKEFLREVAIMKRVRHPNVVLFMGAVTTRPNLSIVTEYLPRGSLYRLIHRPASGEVLDSRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFIPSKSVAGTPEWMAPEFLRGEPSDEKSDVYSFGVILWELVTMQQPWSGLSPPQVVGAVAFQNRKLAIPPNISPVFASLMESCWADDPAQRPSFGGIIVTLKKLLRSPTEMIKMGDMHNP 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02081 926 Pfam Protein tyrosine and serine/threonine kinase 653 905 IPR001245 GO:0004672|GO:0006468
Vivi3g02081 926 SUPERFAMILY Protein kinase-like (PK-like) 629 904 IPR011009 -
Vivi3g02081 926 MobiDBLite consensus disorder prediction 38 71 - -
Vivi3g02081 926 Pfam Ethylene-responsive protein kinase Le-CTR1 228 436 - -
Vivi3g02081 926 ProSitePatterns Protein kinases ATP-binding region signature. 659 680 IPR017441 GO:0005524
Vivi3g02081 926 SMART serkin_6 653 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02081 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Vivi3g02081 926 Gene3D Phosphorylase Kinase; domain 1 646 730 - -
Vivi3g02081 926 FunFam Serine/threonine-protein kinase CTR1 732 917 - -
Vivi3g02081 926 Gene3D Transferase(Phosphotransferase) domain 1 732 919 - -
Vivi3g02081 926 MobiDBLite consensus disorder prediction 38 75 - -
Vivi3g02081 926 PRINTS Tyrosine kinase catalytic domain signature 768 786 IPR001245 GO:0004672|GO:0006468
Vivi3g02081 926 PRINTS Tyrosine kinase catalytic domain signature 878 900 IPR001245 GO:0004672|GO:0006468
Vivi3g02081 926 PRINTS Tyrosine kinase catalytic domain signature 834 856 IPR001245 GO:0004672|GO:0006468
Vivi3g02081 926 PRINTS Tyrosine kinase catalytic domain signature 727 740 IPR001245 GO:0004672|GO:0006468
Vivi3g02081 926 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 182 912 - -
Vivi3g02081 926 FunFam Serine/threonine-protein kinase isoform 1 643 731 - -
Vivi3g02081 926 CDD STKc_MAP3K-like 659 907 - -
Vivi3g02081 926 ProSiteProfiles Protein kinase domain profile. 653 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02081 Vivi-Chr3 34274835 34281752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02081 1 921 MAP Kinase Kinase Kinase AT4G24480 55.714 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vivi3g02081 PK_Tyr_Ser-Thr 3.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02081 - - gmx:100808435 1386.7