Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02063 ATGCCAGAAAAAAAGTCTAAGAAGCTCACCTTCTCCCAAATTGACGCTATTACTGTCGCTGAACGGTATGATCCAACTACCGTGTTTACTGTGCTTCAGGAATTATCACATTACCCTGCATGGAAGAAATTTGATTGGGATGAATTGGTGAAGAAAACCTCTTCTGGTATTTCTAATGCCAGAGAATATCAGATGCTCTGGCGTCATTTGGCGTATCGGTATTCCTTGCCTGATGATTTTGACGCCGATGATCCTATGGATGATGACAGTGACCTAGATTATGAGCTGGAACCGTTACCTTCTATAAGTGCCGAATCTACACCAGAGTGCTCAGCATGTGTGAAGGTGATGATAGCTTCCCGTACACTAAGTGAATCTACCCCTAGTAGCTCTACAATTGAGGCTCCATTGACTGTAAATTTTCCAGTTTGCCATTCATTTATAACTCCAGGAGAAATTTCACAGCCCTCTAATTTGATGGAACGGACAAGCATTACGATTCCAGTTACTGTTCAGAGACAGACACTTCCAACTGTATCATCTTCAGATGCTTTAGAAACCAAAGGAACAGTTGGTGGTACCATGGCTTCCAAAAGGAAAAGAAAAGCATGGTCAGAGGAAGAGGACAATCAGTTACGGGCTGCTGTTCAGAAATGGGGTGAAGGGAATTGGGCAAACATAGCAAAAGGAGACAGCTTTTCTATTAAAAGAAGTGCAACACAATTGTCACAGAGGTGGACCACTTTACGGAAGAAAGACGGGAGTGGCACTTCAGGAACAGTCAATTCAGGAACCACTGTGACCACCACCAACACACAGTATACTGCTGAACAGTTGGCAACTCGTCACTCCTTAAATTTAGCCCTTGACATGCCTCCATTCAAAAAGTTAACTGCTCCTGGAATGACTGATCCTGGTAGGACATCCATGTCAATTAATAATCAACTGCAGTCTCGTAATACGACACAAGTCTCCACAGTTCGTAGTTCTGTACCGCTTCAGCGTCCATCTCAACAAGCTTGTGGTTCCTCAGCAAAACCCACAGTAACCTCTGGAAATCCAGTACCAAATGCTGCAATTTCAGCTCGCGAGTTAAAACCTGCCATTATTCACTCTGGAGCACAAACTGCTTCACGACCAAATGCAGTACCAAATGCTGCAGTTTCAGCTCGCGAGATAAAACCTGTCATTATTCACTCTGGAGCACAAACTGTTTCACGACCAAATGCAGTACCAAATGCTGCAGTTTCAGCTCGCGAGATAAAACCTACCATTGTTCCCTCTGGAGCACAAACTGTTTCACGATCAAATGCAGTACCAAATGCTGCAATTTCAGCTCGCGAGTTAAAACCTACAATTATCCACTCTGGAGCTCAAACGGTTTCGCGATCAAATTCAGTAGTACCAAATGCTGCAATTTCAGGTCGCGAGTTAAAACATGCCATTATTCACTCTGGAGCACAAACCATTTCCCGATCAAATGCAGTACCAAATGCTGCAATTTCGGCCCGCGTGTTAAAACCTGCCATTGCTCACTCTGGAGCACAAACTATATCTCGATCAAATGCAGTACCAAATGCAAATGCTTCACCACAATTAAGGGTCTCTCTACCAAAAAATGTGGTACATCCGGTGCCTGCTGGTAGTTCTATGGCAAAGACATCCATTCCTGCTGGTTTGCCTTCTAACCAAAAGTCTCAACAGGATAAACATGTTTCCGCCGTGAAAGAACTGGAAAAAAGAGTTTCTGGTCCTGGCTCCACACCCAAAGAGAAGGCGATAGAGAAAAATGTGGTACACACAGTGCCTGCTGGTAGTTCTTTGACAAAGACATCCATTTCTGCTGGTTTGCCTTCTGACCAAAAGGATAAACTTGTAACCTCTGTGAAAGAACCAGAAAAAAGAGTTTCTACATTAGTTACTCAGAACCAGGTAGATAACAAACAGAATAAGGTGGGGCTAGATTTAGATAAAGCCAAAAGCATGCCTAGCGAGAAAGTTTTGGAACATAAAGTAGTGTCACAAAATCAAGGAGGCAATGGAGAGCAAGGAAGTGTTAAGAATTCGATTCATATCCCCAAGGCCACTGTGAATGGAAATAACAATTTGAATAAGGAAAGTCAAGTTCAAAATCAAGACAAGACAAGTTCTATTAGTGGAAGCTCTAACCATCAAAACGGGAATGAGAAACTCGGAAACTTGCAAAAATAA 2211 0.4292 MPEKKSKKLTFSQIDAITVAERYDPTTVFTVLQELSHYPAWKKFDWDELVKKTSSGISNAREYQMLWRHLAYRYSLPDDFDADDPMDDDSDLDYELEPLPSISAESTPECSACVKVMIASRTLSESTPSSSTIEAPLTVNFPVCHSFITPGEISQPSNLMERTSITIPVTVQRQTLPTVSSSDALETKGTVGGTMASKRKRKAWSEEEDNQLRAAVQKWGEGNWANIAKGDSFSIKRSATQLSQRWTTLRKKDGSGTSGTVNSGTTVTTTNTQYTAEQLATRHSLNLALDMPPFKKLTAPGMTDPGRTSMSINNQLQSRNTTQVSTVRSSVPLQRPSQQACGSSAKPTVTSGNPVPNAAISARELKPAIIHSGAQTASRPNAVPNAAVSAREIKPVIIHSGAQTVSRPNAVPNAAVSAREIKPTIVPSGAQTVSRSNAVPNAAISARELKPTIIHSGAQTVSRSNSVVPNAAISGRELKHAIIHSGAQTISRSNAVPNAAISARVLKPAIAHSGAQTISRSNAVPNANASPQLRVSLPKNVVHPVPAGSSMAKTSIPAGLPSNQKSQQDKHVSAVKELEKRVSGPGSTPKEKAIEKNVVHTVPAGSSLTKTSISAGLPSDQKDKLVTSVKEPEKRVSTLVTQNQVDNKQNKVGLDLDKAKSMPSEKVLEHKVVSQNQGGNGEQGSVKNSIHIPKATVNGNNNLNKESQVQNQDKTSSISGSSNHQNGNEKLGNLQK 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02063 736 MobiDBLite consensus disorder prediction 330 353 - -
Vivi3g02063 736 Gene3D - 194 255 - -
Vivi3g02063 736 CDD SANT_TRF 202 251 - -
Vivi3g02063 736 MobiDBLite consensus disorder prediction 555 569 - -
Vivi3g02063 736 ProSiteProfiles Myb-like domain profile. 196 250 IPR001005 -
Vivi3g02063 736 MobiDBLite consensus disorder prediction 608 630 - -
Vivi3g02063 736 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 439 - -
Vivi3g02063 736 MobiDBLite consensus disorder prediction 578 597 - -
Vivi3g02063 736 SMART sant 200 252 IPR001005 -
Vivi3g02063 736 MobiDBLite consensus disorder prediction 184 205 - -
Vivi3g02063 736 MobiDBLite consensus disorder prediction 248 267 - -
Vivi3g02063 736 MobiDBLite consensus disorder prediction 546 572 - -
Vivi3g02063 736 MobiDBLite consensus disorder prediction 674 736 - -
Vivi3g02063 736 SUPERFAMILY Homeodomain-like 199 252 IPR009057 -
Vivi3g02063 736 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 196 254 IPR017930 -
Vivi3g02063 736 Pfam Myb-like DNA-binding domain 201 249 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02063 Vivi-Chr3 33951457 33960251 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi3g02063 Myb_DNA-binding 2.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02063 - - vvo:131660933 1357.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02063 3 33951457 33960251 Vivi3g02063 3 33951457 33960251 ECH
Vivi7g01330 7 67720297 67722237 Vivi3g02063 3 33951457 33960251 PCT