Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02062 ATGCCAGAAAAAAAGTCTAAGAAGCTCACCTTCTCCCAAATTGACGCTATTACTGTCGCTGAACGGTATGATCCAACTACCGTGTTTACTGTGCTTCAGGAATTATCACATTACCCTGCATGGAAGAAATTTGATTGGGATGAATTGGTGAAGAAAACCTCTTCTGGTATTTCTAATGCCAGAGAATATCAGATGCTCTGGCGTCATTTGGCGTATCGGTATTCCTTGCCTGATGATTTTGACGCCGATGATCCTATGGATGATGACAGTGACCTAGATTATGAGCTGGAACCGTTACCTTCTATAAGTGCCGAATCTACACCAGAGTGCTCAGCATGTGTGAAGGTGATGATAGCTTCCCGTACACTAAGTGAATCTACCCCTAGTAGCTCTACAATTGAGGCTCCATTGACTGTAAATTTTCCAGTTTGCCATTCATTTATAACTCCAGGAGAAATTTCACAGCCCTCTAATTTGATGGAACGGACAAGCATTACGATTCCAGTTACTGTTCAGAGACAGACACTTCCAACTGTATCATCTTCAGATGCTTTAGAAACCAAAGGAACAGTTGGTGGTACCATGGCTTCCAAAAGGAAAAGAAAAGCATGGTCAGAGGAAGAGGACAATCAGTTACGGGCTGCTGTTCAGAAATGGGGTGAAGGGAATTGGGCAAACATAGCAAAAGGAGACAGCTTTTCTATTAAAAGAAGTGCAACACAATTGTCACAGAGGTGGACCACTTTACGGAAGAAAGACGGGAGTGGCACTTCAGGAACAGTCAATTCAGGAACCACTGTGACCACCACCAACACACAGTATACTGCTGAACAGTTGGCAACTCGTCACTCCTTAAATTTAGCCCTTGACATGCCTCCATTCAAAAAGTTAACTGCTCCTGGAATGACTGATCCTGGTAGGACATCCATGTCAATTAATAATCAACTGCAGTCTCGTAATACGACACAAGTCTCCACAGTTCGTAGTTCTGTACCGCTTCAGCGTCCATCTCAACAAGCTTGTGGTTCCTCAGCAAAACCCACAGTAACCTCTGGAAATCCAGTACCAAATGCTGCAATTTCAGCTCGCGAGTTAAAACCTGCCATTATTCACTCTGGAGCACAAACTGCTTCACGACCAAATGCAGTACCAAATGCTGCAGTTTCAGCTCGCGAGATAAAACCTGTCATTATTCACTCTGGAGCACAAACTGTTTCACGACCAAATGCAGTACCAAATGCTGCAGTTTCAGCTCGCGAGATAAAACCTACCATTGTTCCCTCTGGAGCACAAACTGTTTCACGATCAAATGCAGTACCAAATGCTGCAATTTCAGCTCGCGAGTTAAAACCTACAATTATCCACTCTGGAGCTCAAACGGTTTCGCGATCAAATTCAGTAGTACCAAATGCTGCAATTTCAGGTCGCGAGTTAAAACATGCCATTATTCACTCTGGAGCACAAACCATTTCCCGATCAAATGCAGTACCAAATGCTGCAATTTCGGCCCGCGTGTTAAAACCTGCCATTGCTCACTCTGGAGCACAAACTATATCTCGATCAAATGCAGTACCAAATGCAAATGCTTCACCACAATTAAGGGTCTCTCTACCAAAAAATGTGGTACATCCGGTGCCTGCTGGTAGTTCTATGGCAAAGACATCCATTCCTGCTGGTTTGCCTTCTAACCAAAAGGATAAACATGTTTCCGCCGTGAAAGAACTGGAAAAAAGAGTTTCTGGTCCTGGCTCCACACCCAAAGAGAAGGCGATAGAGAAAAATGTGGTACACACAGTGCCTGCTGGTAGTTCTTTGACAAAGACATCCATTTCTGCTGGTTTGCCTTCTGACCAAAAGGATAAACTTGTAACCTCTGTGAAAGAACCAGAAAAAAGAGTTTCTACATTAGTTACTCAGAACCAGGTAGATAACAAACAGAATAAGGTGGGGCTAGATTTAGATAAAGCCAAAAGCATGCCTAGCGAGAAAGTTTTGGAACATAAAGTAGTGTCACAAAATCAAGGAGGCAATGGAGAGCAAGGAAGTGTTAAGAATTCGATTCATATCCCCAAGGCCACTGTGAATGGAAATAACAATTTGAATAAGGAAAGTCAAGTTCAAAATCAAGACAAGACAAGTTCTATTAGTGGAAGCTCTAACCATCAAAACGGGAATGAGAAACTCGGAAACTTGCAAAAATAA 2202 0.4292 MPEKKSKKLTFSQIDAITVAERYDPTTVFTVLQELSHYPAWKKFDWDELVKKTSSGISNAREYQMLWRHLAYRYSLPDDFDADDPMDDDSDLDYELEPLPSISAESTPECSACVKVMIASRTLSESTPSSSTIEAPLTVNFPVCHSFITPGEISQPSNLMERTSITIPVTVQRQTLPTVSSSDALETKGTVGGTMASKRKRKAWSEEEDNQLRAAVQKWGEGNWANIAKGDSFSIKRSATQLSQRWTTLRKKDGSGTSGTVNSGTTVTTTNTQYTAEQLATRHSLNLALDMPPFKKLTAPGMTDPGRTSMSINNQLQSRNTTQVSTVRSSVPLQRPSQQACGSSAKPTVTSGNPVPNAAISARELKPAIIHSGAQTASRPNAVPNAAVSAREIKPVIIHSGAQTVSRPNAVPNAAVSAREIKPTIVPSGAQTVSRSNAVPNAAISARELKPTIIHSGAQTVSRSNSVVPNAAISGRELKHAIIHSGAQTISRSNAVPNAAISARVLKPAIAHSGAQTISRSNAVPNANASPQLRVSLPKNVVHPVPAGSSMAKTSIPAGLPSNQKDKHVSAVKELEKRVSGPGSTPKEKAIEKNVVHTVPAGSSLTKTSISAGLPSDQKDKLVTSVKEPEKRVSTLVTQNQVDNKQNKVGLDLDKAKSMPSEKVLEHKVVSQNQGGNGEQGSVKNSIHIPKATVNGNNNLNKESQVQNQDKTSSISGSSNHQNGNEKLGNLQK 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02062 733 MobiDBLite consensus disorder prediction 671 733 - -
Vivi3g02062 733 Gene3D - 194 255 - -
Vivi3g02062 733 MobiDBLite consensus disorder prediction 605 627 - -
Vivi3g02062 733 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 439 - -
Vivi3g02062 733 MobiDBLite consensus disorder prediction 330 353 - -
Vivi3g02062 733 CDD SANT_TRF 202 251 - -
Vivi3g02062 733 ProSiteProfiles Myb-like domain profile. 196 250 IPR001005 -
Vivi3g02062 733 SMART sant 200 252 IPR001005 -
Vivi3g02062 733 MobiDBLite consensus disorder prediction 248 267 - -
Vivi3g02062 733 MobiDBLite consensus disorder prediction 184 205 - -
Vivi3g02062 733 SUPERFAMILY Homeodomain-like 199 252 IPR009057 -
Vivi3g02062 733 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 196 254 IPR017930 -
Vivi3g02062 733 Pfam Myb-like DNA-binding domain 201 249 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02062 Vivi-Chr3 33951457 33960251 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi3g02062 Myb_DNA-binding 2.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02062 - - vvo:131660933 1346.64