Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02047 ATGGAAGAGACTATTTTGGATGATGAACTTGAATCAAATATTAACCTTTCTGAAGAGCCACAAATTAATATTGTTGCAGAAGAGAATATTGAGCCTTATGTAGGAATGGAATTTGATTCATTGGAAAAAGCTACAGATTTTTACAGATTATTTTCTAAAGCAAAAGGATTTGGAATTCGTACTCGATCAAGTAAGCCAAATTATTGCATTTTAGTATGTGTTAGGGAGGGTAAACTACCGGTGAAAAGTACGAATGATAATAACGTGGAAGTGAAGAAAAAATGTTCAACCATGCGCATGGGATGTCAAGCATCACTTACTATATCAAAAGAAAATAATAGCCACATGTGGACTGTAAAATCATACGACAATAATCACAATCATGCCATGGCTAGTCCCAAAAGTGTATCTTATTTGAGGTGTCATAAAAATATGAATAATGCTGCAAAAAATCTTATTGAGAAGTTTAGTGAAGAAGGTTTGCCTACTGGAAAGGTTGCTTCAATGTTTAAGGAAAGTGATTTAGCTTTTTCTAATAGAGACTGTTGGAATCACATGAGAAATGTTCGAACGAATAATTTGGATATCGGAGATGCACAAGCAGTTTTTAATTATTGCAAGCACAAGCAAGCTCAAAATTCTAATTTTTTCTATGCAATACAGTGTGACGATGAAGCTAGAATGGTAAAAAAATTTTGGATTGATGCCAGATCAAGGTTAGCTTATCAACATTTTGGAGACGTTGTTACCTTTGACACTACTTATAAAACCAACAAATATAGTATGCCATTTGCCCCATTTACTGGGGTAAACCATCATCTCCAATCAATTTTATTTGGCTGTGCATTATTACAAGATGAATCAGAAATATCTTTTACATGGTTATTTGAAACTTGGCTTGAAGCAATGAATGGAAAAAAACCTATATCAATAATAACTGATCAAGACTTAGCTATTGGAGCTGCAGTGACTAAGGTATTTCCACAAACCCGTCATCGTTTATGTTTGTGGCACATAAGAAAGAAGTTTCCAGAAAAGCTTGCACATATATATCACAAAAAATCAAAGTTTAAGCATGAGCTAAAGAGATGCATTCGAGAATCACCAACTGTAAATGATTTTGAAGTTGATTGGCAACAAATAATGGATACCTACAATTTACAAGAAAATGAATGGCTTCAGCGGTTGTTTGAAATTCGAGAGTCATGGATACCCGTTTATAACAGAAAAACTTTTTTTGCCGGTATGAATACTACACAAAGAAGTGAGAGCATCAATTCTTTTTTTGACTCTTTTGTTAATTCAACCACAACACTACAAGAATTTGTGGTAAAATTTGAAAAGGCAGTTAATAATCGTTATGAAGCTGAAAAGAGAGAGGACTTTGAGTCTAAACATAAATCACGCATTTTGAGTATCAAATCGAAAATAGAGGAGCATGCGGCATCGATTTATACAAGAAATATGTTTGGAAAATTTCAACATGAGCTTGCACTTGTTAGCCAATTTACAAAGCACAAGATTGAGAAAAATGGCTCACAATATAGGTATCAAATATCCAATTGTTTTAAAGATCGAGACAAATTCATCGTTGATATAAATTTAGAATCAAAGGATGCTACTTGTACTTGTCAGCTTTTTGAATTTATGAGAATATTATGCAGCCACATTTTGACAATTTTTCAAACTAAAAATATACTTCAAATTTAA 1710 0.3287 MEETILDDELESNINLSEEPQINIVAEENIEPYVGMEFDSLEKATDFYRLFSKAKGFGIRTRSSKPNYCILVCVREGKLPVKSTNDNNVEVKKKCSTMRMGCQASLTISKENNSHMWTVKSYDNNHNHAMASPKSVSYLRCHKNMNNAAKNLIEKFSEEGLPTGKVASMFKESDLAFSNRDCWNHMRNVRTNNLDIGDAQAVFNYCKHKQAQNSNFFYAIQCDDEARMVKKFWIDARSRLAYQHFGDVVTFDTTYKTNKYSMPFAPFTGVNHHLQSILFGCALLQDESEISFTWLFETWLEAMNGKKPISIITDQDLAIGAAVTKVFPQTRHRLCLWHIRKKFPEKLAHIYHKKSKFKHELKRCIRESPTVNDFEVDWQQIMDTYNLQENEWLQRLFEIRESWIPVYNRKTFFAGMNTTQRSESINSFFDSFVNSTTTLQEFVVKFEKAVNNRYEAEKREDFESKHKSRILSIKSKIEEHAASIYTRNMFGKFQHELALVSQFTKHKIEKNGSQYRYQISNCFKDRDKFIVDINLESKDATCTCQLFEFMRILCSHILTIFQTKNILQI 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02047 569 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 561 IPR031052 GO:0006355
Vivi3g02047 569 Pfam MULE transposase domain 248 342 IPR018289 -
Vivi3g02047 569 Coils Coil 139 159 - -
Vivi3g02047 569 Pfam SWIM zinc finger 531 565 IPR007527 GO:0008270
Vivi3g02047 569 ProSiteProfiles Zinc finger SWIM-type profile. 529 565 IPR007527 GO:0008270
Vivi3g02047 569 SMART 26again6 540 567 IPR006564 GO:0008270
Vivi3g02047 569 Pfam FAR1 DNA-binding domain 46 130 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02047 Vivi-Chr3 33810402 33812111 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g02047 MULE 9.4e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02047 - - vvo:131657854 1169.07