Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02038 ATGATAAGGCTTGGTTCTAATTACAGTATTAGCAATACCACCAATGCTATTACTACTGCTACTATCTTTCTGCTTGGTCTTCTTCTGTTACACAATTCCTCTACTCAACTTATTCTTGCAACTTCTACTTCCATCGTCAAGTTCCTTCCTGGTTTTCAAGGACCCCTTCCTTTTCTACTACAAACTGGCTACATTCAAGTGAATGAAACTGAAACTGACGATGACACTGCTGAAGTGTTCTACTATTTTATAGAGTCTGAGAATAATGCTAAGGAAGATCCTCTCTTGCTTTGGCTAACCGGCGGTCCTGGTTGCTCCTCCCTCACTGGCCTAGCATTCACTACTACAATTTTGAGTTTTAATAGCAATAATTTAATAGCATTTATTTATAAAGTGCTATTAAAAATATCAAACAAAGAATTATAA 426 0.3662 MIRLGSNYSISNTTNAITTATIFLLGLLLLHNSSTQLILATSTSIVKFLPGFQGPLPFLLQTGYIQVNETETDDDTAEVFYYFIESENNAKEDPLLLWLTGGPGCSSLTGLAFTTTILSFNSNNLIAFIYKVLLKISNKEL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02038 141 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 44 115 IPR001563 GO:0004185|GO:0006508
Vivi3g02038 141 SUPERFAMILY alpha/beta-Hydrolases 41 119 IPR029058 -
Vivi3g02038 141 Gene3D alpha/beta hydrolase 40 134 IPR029058 -
Vivi3g02038 141 Pfam Serine carboxypeptidase 50 113 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02038 Vivi-Chr3 33727856 33728281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02038 40 78 Calmodulin-binding Proteins AT2G22960 56.410 3.36e-09 51.2