Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02034 ATGAAAGGAGAGTACGTAGATCAACATTCAAAGCTTCACCAGTCACATACACAGTCACAGTCACAAAACAATCCATTTCTTCCTTTCCAGCTCTCTCATCATGAATGTCAAACAGTCGGCGAAGACGATAACCGCTCCGGCGGTGGCGCAACCGCTCAGAAACCGAACTCTTCTGGCGACGGAGCTACCATTGAGGTTGTCAGGCGGCCGAGAGGACGTCCGCCTGGATCTAAAAACAGGCCTAAACCGCCTGTTATCATAACACGCGATCCTGAGCCTGCTATGAGTCCTTTTATTCTAGAAGTTTCTGCAGGAAACGACGTCGTGCAAGCGGTTGCTGAGTTTAGTCATCGGAGAAATATTGGCTTGTGTGTACTAACTGGTTCAGGAGCTGTTGCTAATGTTACTCTTCGTCAACCGTCAACTACGCCGGGAACCACCGTTACTTTTCACGGCCGGTTTGATATTCTATCCTTAACCGCTACTTTTCTTCCGCAATCATCATCAGGTGGCTCTTCTCCATCTCTTCCTAGTGGTTTCTCCATCTCACTCGCTGGTCCGCAGGGACAGATCGTCGGAGGAATTGTTGCTGGAAACTTGATAGCTGCGGGAACGGTGTTTGTTATTGCTGCTTCGTTTAATAATCCGTCGTATCACAGGTTACCTCCGGAGGAAGAAGGAGGAAACTCGGTGTCAGGCGGTGACGGAATTTCTCCACCTGTTTCCGGTGCGGTGGATAGCGGTCAAGGTCAAGGCGGTGCTGAGTCGTGCGGGATGTCTATGTACAGCTGTCATTTACCACCGTCGGATGTGATTTGGGCTCCTTCAGCAAGACCACCACCTTACTGA 849 0.5018 MKGEYVDQHSKLHQSHTQSQSQNNPFLPFQLSHHECQTVGEDDNRSGGGATAQKPNSSGDGATIEVVRRPRGRPPGSKNRPKPPVIITRDPEPAMSPFILEVSAGNDVVQAVAEFSHRRNIGLCVLTGSGAVANVTLRQPSTTPGTTVTFHGRFDILSLTATFLPQSSSGGSSPSLPSGFSISLAGPQGQIVGGIVAGNLIAAGTVFVIAASFNNPSYHRLPPEEEGGNSVSGGDGISPPVSGAVDSGQGQGGAESCGMSMYSCHLPPSDVIWAPSARPPPY 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02034 282 PIRSF ESCAROLA 2 273 IPR014476 GO:0003680
Vivi3g02034 282 MobiDBLite consensus disorder prediction 1 90 - -
Vivi3g02034 282 ProSiteProfiles PPC domain profile profile. 92 234 IPR005175 -
Vivi3g02034 282 MobiDBLite consensus disorder prediction 220 256 - -
Vivi3g02034 282 Gene3D - 96 232 - -
Vivi3g02034 282 Pfam Plants and Prokaryotes Conserved (PCC) domain 97 215 IPR005175 -
Vivi3g02034 282 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 274 IPR014476 GO:0003680
Vivi3g02034 282 FunFam AT-hook motif nuclear-localized protein 96 232 - -
Vivi3g02034 282 CDD DUF296 97 213 IPR005175 -
Vivi3g02034 282 MobiDBLite consensus disorder prediction 12 31 - -
Vivi3g02034 282 SUPERFAMILY AF0104/ALDC/Ptd012-like 94 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02034 Vivi-Chr3 33700950 33703000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02034 60 282 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 66.376 2.40e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02034 - - gmx:100788098 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02034 3 33700950 33703000 Vivi3g02034 3 33700950 33703000 ECH