Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02014 ATGGGTTTTCTTTCTTGCAATGCAGAGTCTGCAATTGCTACCTGCGATCCACACTATTGGGATCTCAAAAAAAGAAACAAATCAATAACAAATCGCACCTACACTGTCAAGGAGTTTCTCTACACCGACCTCGTCGCCGCCACAAACGGTTTCTCCGATGATAGCTACTTAGGTAAAGGCAGCCACGGCAGAGTTTACAGAGCAACGTTAAACGACGGCAACGGTAATTTACTCGTCGCCGTTAAAACAACTAAGCAAACTACAAAGATTACGCATAACCATGCTACCAACTGCACCGGTTGCGGTAACTGTACGAGTCCTGCTGAGAATGAGATCGAGATTCTTTCTCAAGTTCCGAGTCCTCGCCTCGTGAATCTCATCGGTTACTGCACCGACCCAAACGGCAATAAATTAATTGTCGTTGAATACATGCCAAACGGTTCGCTTCATGATTTATTGCATTCCGCGTCTAAACCGCCCGGCTGGACCAGACGAATCCGGTTCGCATTACATGTTGCAAAAGCGGTTCGGTCGTTGCACGGTTCGAACCCTCCGGTGATCCACCGTGATATTAAATCCTCCAATGTTTTAATCGATCATGATTGGAAAGCAAGACTCGGTGACTTCGGTCTTGCACTTAGAGGACACGTGGAGGACGTTCGCGTTAAGTGTACGCCACCGGCGGGGACGTTAGGGTACCTCGATCCATGCTATCTTGCGCCGGGGGATCTTAGTGCGAAGAGTGATGTCTTCAGTTTTGGGATCTTGTTGTTGGAGATAATCAGTGGAAGGAATGCTATTGATGTTAATTATAGTCCTCCGTCGGTTGTTGACTGGGCGGTGCCGCTAGTTAGACGAGGCGACTTCGCCGGAATCTGTGACCGGAGAATAGGAGCACCGTCGGATTTGTCGGTGATTCGGCTGATTGCGGTGCTTGCTGCGAGATGTGTTAGATCGACAGCGGAGAAGCGGCCGGCGATGGTGGAGGTTGTGGAATGTCTTAAACTGGCGGGGAAGAAGATTCAGTCGTCGCCGATTTGGAATAGTTTCAGGTGGCGCGTGACGCGAGTGGAGAGTGCGCAACCGTTGATGAAGTGTGATGCGTATGATCAAGATTATGATAATTATGATTATGATTATGGTTATGATTATCATAATGATTGTAATGATTGGGATAATAAGAGTGATGAGGTTGTTGTGAAAATCGTTAAGAGTGGGTGTGGGAGCAGCAGAAGGAAGAGTAAAGTATCCAGTGTGGCGAGTGCAGAGTCTGTGACTAAACACTCCAAGAAAGTGGCGAGATCTAAGCCGTCGAAAAAGGTAACTAGATCTAAAACCGTTGGTTCTTCTTCTAGTTGTGTTAGTACTAGTAGTTCTAGTAGGAAAAGTGGGATTAAAATTCAAAATCAAAAGGCTTCTGAGAAAACGCGTGCAATGAAGCTGAAAAAGTCAAAGTCAACGGGGATGTTGCAAGATCCTCATTTGGGTGAGACTGAGACGATAACATTAACCATGTCAAAGTTGGTTATTAGAGATAATAAGAAGTTTGAAAAGAAGATGCTTGAAAAACCGTTGGTTTATTCACATGGTTGGGAGTCTGAATAG 1605 0.4592 MGFLSCNAESAIATCDPHYWDLKKRNKSITNRTYTVKEFLYTDLVAATNGFSDDSYLGKGSHGRVYRATLNDGNGNLLVAVKTTKQTTKITHNHATNCTGCGNCTSPAENEIEILSQVPSPRLVNLIGYCTDPNGNKLIVVEYMPNGSLHDLLHSASKPPGWTRRIRFALHVAKAVRSLHGSNPPVIHRDIKSSNVLIDHDWKARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPGDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLVRRGDFAGICDRRIGAPSDLSVIRLIAVLAARCVRSTAEKRPAMVEVVECLKLAGKKIQSSPIWNSFRWRVTRVESAQPLMKCDAYDQDYDNYDYDYGYDYHNDCNDWDNKSDEVVVKIVKSGCGSSRRKSKVSSVASAESVTKHSKKVARSKPSKKVTRSKTVGSSSSCVSTSSSSRKSGIKIQNQKASEKTRAMKLKKSKSTGMLQDPHLGETETITLTMSKLVIRDNKKFEKKMLEKPLVYSHGWESE 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02014 534 MobiDBLite consensus disorder prediction 410 425 - -
Vivi3g02014 534 MobiDBLite consensus disorder prediction 442 472 - -
Vivi3g02014 534 SUPERFAMILY Protein kinase-like (PK-like) 29 334 IPR011009 -
Vivi3g02014 534 MobiDBLite consensus disorder prediction 409 492 - -
Vivi3g02014 534 Gene3D Phosphorylase Kinase; domain 1 21 143 - -
Vivi3g02014 534 PANTHER OS01G0253100 PROTEIN 28 336 - -
Vivi3g02014 534 ProSiteProfiles Protein kinase domain profile. 51 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02014 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Vivi3g02014 534 SMART serkin_6 51 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02014 534 ProSitePatterns Protein kinases ATP-binding region signature. 57 82 IPR017441 GO:0005524
Vivi3g02014 534 Pfam Protein tyrosine and serine/threonine kinase 55 334 IPR001245 GO:0004672|GO:0006468
Vivi3g02014 534 Gene3D Transferase(Phosphotransferase) domain 1 144 348 - -
Vivi3g02014 534 FunFam Serine/threonine-protein kinase-like protein 144 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02014 Vivi-Chr3 33457677 33460079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02014 17 345 Receptor kinase-like Gene Family AT3G59420 38.922 6.07e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vivi3g02014 PK_Tyr_Ser-Thr 4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02014 - - cam:101503747 717.998