Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01985 ATGGATGAGATACCGTCTTCCACAAATGTAACTCAAGATGTTGGTTCAATCTCCGATGAAAATAAAGAATCGTGGCAACATTTTATCTTCCACGACCTTTCATCAATCAAGGATTTCTATGCTAAATACGCTCATGAAAAGGGATTTAGCGTGAGAAGAAATTTGCACTCCTTCTTTGATTCTCGTAACAAAAAAACGGACATTGTGCAATATATCCGTTATGTTTGTAACAAGCATGGTTTCAAGCACGAAAGTCGGGCGGATCCTAAGAACAAGACAAACTCGGATACTCCTGTTCTCATTGAATATCAGAAACAGAAAGAACTTCCCGAGGAAAGGACTGGTTGCCCAGCTAGTATTTCGTTGAAGTATGATTCCAATGTTAAAGGTTATCACATATACAAATGGAATGTTACTCATAACCACCCTCTCCATAAACCCGAGCATTCGCATTACTTGAGATCGGCTCGAGAGATTAGTGTGCCTCAAAAACAACTTGCTATAATAAATTCAAAATCAGGCATGTCTGTAAGATCCTCCTTTCAAGTTATGCGTCAAATAGCTGGTTGTTCAAAGAACCTTGGGTATTGCTTCCAAGATTTAAAGAACTTTCTCACCACTGTTCGACAAAAGGAAATGGTTATTGGTGATGCAACTATTATCCAAGAGTATCTTAGAAACGAAGCTTTGAGGAACCCATCATTTTATTATGATATCCAAGTAGATTCTGAAGAGAACATAGCTAGTATTTTCTGGTCAGATGCAATCATGCAGCAAGACTATGAATTATTTGGTGATCTCATCAGTTTCGACACAACTTATCGAACAAATACGGAGTATCGCCCATTAGCTCCGTTTCTTGGATTTGACAACCACCGTAAGAGTGTATTATTTGGTTGTGCCCTGCTCTATGATGAGACTTCAGCAAGTTTTGATTGGTTGTTTACCACTTTCCTGAAGTGCATGAAAAATAAGAAACCCATTACAATTTATACAGACCAAGCTTCTGCTTTGATGAAGTCAGTTCCAAACATCTTCCCCGATGTCTTCCATGGGTTGTGTTCTTGGCACATGGGGGAGAATGCAAAGTCCAACTTAGGCTCTCGTTGCAATGGTGCATTTCTTGACGAACTACATCACTTGGTTTCGAATGTTGATGATGAGGCAGAGTTTGACTTCAATTGA 1185 0.3924 MDEIPSSTNVTQDVGSISDENKESWQHFIFHDLSSIKDFYAKYAHEKGFSVRRNLHSFFDSRNKKTDIVQYIRYVCNKHGFKHESRADPKNKTNSDTPVLIEYQKQKELPEERTGCPASISLKYDSNVKGYHIYKWNVTHNHPLHKPEHSHYLRSAREISVPQKQLAIINSKSGMSVRSSFQVMRQIAGCSKNLGYCFQDLKNFLTTVRQKEMVIGDATIIQEYLRNEALRNPSFYYDIQVDSEENIASIFWSDAIMQQDYELFGDLISFDTTYRTNTEYRPLAPFLGFDNHRKSVLFGCALLYDETSASFDWLFTTFLKCMKNKKPITIYTDQASALMKSVPNIFPDVFHGLCSWHMGENAKSNLGSRCNGAFLDELHHLVSNVDDEAEFDFN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01985 394 Pfam FAR1 DNA-binding domain 38 145 IPR004330 -
Vivi3g01985 394 Pfam MULE transposase domain 268 359 IPR018289 -
Vivi3g01985 394 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 392 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01985 Vivi-Chr3 32909830 32911766 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g01985 FAR1 4.4e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01985 - - vvo:131652168 667.922