Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01974 ATGAATTATCATTCAATGACTCCTACTACTAATAACAAACCTTCATCTACAACTCAATCGCTTCTGCAGCGTAGGCTTCCTAGACAGAGGAGGATAGACGGTGAAACCTTTCATTCAACGGTGGATGTAACTATTTCGTTACCGGCTTCTCCTCACAGTTCTGGTTCTTATAGTTGGTCTTCTTCTCCTGTTCTTCAACCGCTTCCGCTTCCGTTACCGTTACCGTTACCGGAGTCGCCGTTGACTCGACGACCTGATCATCATGCTACGTTACCCATAACCAGAAAGACAGTGGACCATGATGCTGTGAGAAGGTCAAAATCTTCCAGCAATTTAAGAAGACCCATTTTTGCCACAGGATCTGGAAATGCAAAGAGTGATTTAAGAGTGAACATTCCTCCAGTTAGTGGCTTGGTGGCAAGCAACGGCTCTAGTAAAGATATTAGAAAACACTCTCATGACAATGACTGTGAAGGTCTTACCAATGTGAAGTTGCAATTTACTGCCACGAGTACCCCAACAAGCATATTATCCAGTCCTCTTACTAGTTCCGGCAGATTAAGCAGTGTAGATTTATCTGATCCTTCCATCAGTTTTCCTCGGGATCTTAACGACATTTTGGAACTTCCCGCTAAAACTCCTCATAGTTCGCGTAGCTCGGCGAACCACAGTCCTAAACAGCACAAAACTATTCAAGGAGGATCTTATTCTCACCACCCTAAATTTTACTCCAGGGTGTCGTCTGAAAATAACCATGCCGATGCACATCCATTGCCCCTTCCACCTCCAACGAGAGCTTCACTACAGCCACAACAATCTTCCGCGCAAAATCAATCAACTGCTAAGTTGCATGACTCAACAGAAAATCTTCATTCAAGCACGAGTCAATGGCAGAAAGGAAAACTAATTGGACAAGGATCATTTGGAAGAGTTTATCATGCAACAAACCTAGAAACTGGAGCCTCGTGTGCCATGAAAGAGGTGGATCTGTTTCCTGATGATCCCATGTCGGCTCACTATATAAAGCAACTCGATCAAGAAATCGGGACTCTTGGTCAGTTACACCACCCCAACATTATGCAATATTATGGCAGTGAATTAGTTGGTGATCGATTGCGCATGTATATGGAATATGTCAATCCTGGATCACTTCAGGAGTTTATGCAAGAACATAATGGGGTTCTGACAGAATCCGTGGTTCGCAATTTTACGCGGCATATTCTCTCTGGATTGGCATACTTACATAGTAACGAGACTATCCACAGGGACATTAAAGGTGCAAATTTGCTAGTTGATCCATCAGGCACTCTCAAGCTTGCAGGTTTTGGGGTGTCAAAAACTATGACAGAGAAATCATATGAACTATCGCTGAAAAGTCCCTACTGGATGGCGCCAGAGCTCATGATGTCTGCCTTGATGAAAAAAAACAACCCCAACGTCACCACGGCTGTTGATATATGGAGCTTAGGATGCACCATCATCGAAATGCTGACCGGAAAATCCCCATGGAGCGAGTTTTCAGGGCACCGAGTCGTGTTCAAGGTACTGCACAGATCCCCGGACATACCCGAGACTTTATCGCAAGATGGGAAGGATTTTCTTGAGCAGTGTTTCAAAAGGAATCCTGCAGATCGACCATCCGCGGATGTGCTTCTAACACATGCCTTTGTACAAAATTTGCATGAACAAGATGTTATAGTTCAGTCACTAGGCACCCTGCACAAAGATGAATCGCGCAAACATAGTAGTCCAGGATACGGCTCAAAACTTAGCCGTGGTGTAGCTCCAGCTTCCTTTCGTGCACGAATTTTTAGCAAAATTCAAAATTTAATCGGGGGAACAGGAATAAGGAGCAAAAGCACTCGTTAG 1869 0.4425 MNYHSMTPTTNNKPSSTTQSLLQRRLPRQRRIDGETFHSTVDVTISLPASPHSSGSYSWSSSPVLQPLPLPLPLPLPESPLTRRPDHHATLPITRKTVDHDAVRRSKSSSNLRRPIFATGSGNAKSDLRVNIPPVSGLVASNGSSKDIRKHSHDNDCEGLTNVKLQFTATSTPTSILSSPLTSSGRLSSVDLSDPSISFPRDLNDILELPAKTPHSSRSSANHSPKQHKTIQGGSYSHHPKFYSRVSSENNHADAHPLPLPPPTRASLQPQQSSAQNQSTAKLHDSTENLHSSTSQWQKGKLIGQGSFGRVYHATNLETGASCAMKEVDLFPDDPMSAHYIKQLDQEIGTLGQLHHPNIMQYYGSELVGDRLRMYMEYVNPGSLQEFMQEHNGVLTESVVRNFTRHILSGLAYLHSNETIHRDIKGANLLVDPSGTLKLAGFGVSKTMTEKSYELSLKSPYWMAPELMMSALMKKNNPNVTTAVDIWSLGCTIIEMLTGKSPWSEFSGHRVVFKVLHRSPDIPETLSQDGKDFLEQCFKRNPADRPSADVLLTHAFVQNLHEQDVIVQSLGTLHKDESRKHSSPGYGSKLSRGVAPASFRARIFSKIQNLIGGTGIRSKSTR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01974 622 SUPERFAMILY Protein kinase-like (PK-like) 290 569 IPR011009 -
Vivi3g01974 622 MobiDBLite consensus disorder prediction 213 234 - -
Vivi3g01974 622 ProSitePatterns Protein kinases ATP-binding region signature. 303 326 IPR017441 GO:0005524
Vivi3g01974 622 MobiDBLite consensus disorder prediction 81 108 - -
Vivi3g01974 622 PRINTS Tyrosine kinase catalytic domain signature 413 431 IPR001245 GO:0004672|GO:0006468
Vivi3g01974 622 PRINTS Tyrosine kinase catalytic domain signature 376 389 IPR001245 GO:0004672|GO:0006468
Vivi3g01974 622 PRINTS Tyrosine kinase catalytic domain signature 484 506 IPR001245 GO:0004672|GO:0006468
Vivi3g01974 622 PRINTS Tyrosine kinase catalytic domain signature 526 548 IPR001245 GO:0004672|GO:0006468
Vivi3g01974 622 Gene3D Transferase(Phosphotransferase) domain 1 293 589 - -
Vivi3g01974 622 MobiDBLite consensus disorder prediction 76 120 - -
Vivi3g01974 622 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 567 - -
Vivi3g01974 622 SMART serkin_6 297 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01974 622 MobiDBLite consensus disorder prediction 212 298 - -
Vivi3g01974 622 ProSiteProfiles Protein kinase domain profile. 297 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01974 622 MobiDBLite consensus disorder prediction 1 22 - -
Vivi3g01974 622 Pfam Protein kinase domain 298 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01974 622 MobiDBLite consensus disorder prediction 173 195 - -
Vivi3g01974 622 MobiDBLite consensus disorder prediction 267 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01974 Vivi-Chr3 32540601 32545066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01974 239 559 MAP Kinase Kinase Kinase AT5G66850 58.824 2.37e-130 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi3g01974 Pkinase 2.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01974 - - psat:127088187 728.783