Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01932 ATGTCTAGTCGGAATGAACGCCAACACCAACATCAACATCAAAACCAGCACCAACACCAACATCAAAATCAACATCAACATCAACATCAAAACCAGCACCAACATCAACATCAAAATCAACATCAACACCATACCGTTCCTCTTGCAGTGCTTTTGAAGCGTGAATTGGCGAATGAGAAAGTTGAGAAATCGGATTTGGTTGTTGTGTATAGCCAAGCTAGCGAGAACAAGAAAGGAGAGGATTTCACGTTGATAAAGACCGAAAGGCAAAGAGTGGTTGCAGATGGGGTTTCTACCTATTCTGTTTTTGGGCTATTTGATGGACACAATGGATCTGCTGCTGCCGTTTATACCAAGGAGAATCTTCTGAACAATGTTTTAAGTGCCATTCCCCCAGATCTCAACAGAGATGAGTGGGTAGCAGCATTGCCGAGGGCTTTGGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAACAAAAAGCTAAAACATCAGGAACAACTGTAACCTTTGTGATTATAGAAGGATGGGTTATAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAACCTTCTGAAGGTGGGATTCATTACTTGTCAGCAGATCATCGACTAGACACCAATGAAGAGGAGAGGGCGCGCATCACTTCTAGTGGGGGTGAAGTTGGTCGGCTAAACACAGGTGGAGGTGCGGAGGTTGGCCCGTTGAGATGTTGGCCTGGTGGTCTGTGTCTTTCTCGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTCCCTGTACCATATGTAAAGCAAGTAAAGATTTCCACTTCTGGAGGAAGACTTATTATCTGCAGTGATGGAGTCTGGGATGCTCTATCTGCAGAAGCGGTCCTTGATTGTTGTCGTGGCATGTCAGCGGAGGCTGCAGCACCACATATTGTAAAAGAATCTTTGCAAGCAAAGGGACTTAGGGATGACACAACTTGCATCGTGGTTGATATATTACCGCAGGAGAAGCCACCTACTTCTGCACCAACACAAAAGAGACCGGTAAAAGGAATGTTGAAGGCCATTTTTCGGAAAAAGTCCTCTGAGCCATCTTCATATATTGAAAAAGAATACGTTGAGCCAGATATGGTACGGGAATTATACGAGGAAGGATCTGCCATGCTTTCAGAAAGGTTTGAAACAAAATATCCACTCTGCAACATGTTCAAGTTATTCATGTGTGCAGTATGTCAAGTTGAGATTAAACCCGGGGAGGGCATTTCAGTACACGAGGGTGCGCCTAACCAAGGGAAACCGCGCCCCTGGGATGGACCTTTCCTATGCTCAAGTTGCCAAGAAAAGAAAGAAGCCATGGAAGGGAAACGAACATCAGATAGACATAACAGGGGAAGTGACTAA 1398 0.4428 MSSRNERQHQHQHQNQHQHQHQNQHQHQHQNQHQHQHQNQHQHHTVPLAVLLKRELANEKVEKSDLVVVYSQASENKKGEDFTLIKTERQRVVADGVSTYSVFGLFDGHNGSAAAVYTKENLLNNVLSAIPPDLNRDEWVAALPRALVAGFVKTDKDFQQKAKTSGTTVTFVIIEGWVITVASVGDSRCILEPSEGGIHYLSADHRLDTNEEERARITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKISTSGGRLIICSDGVWDALSAEAVLDCCRGMSAEAAAPHIVKESLQAKGLRDDTTCIVVDILPQEKPPTSAPTQKRPVKGMLKAIFRKKSSEPSSYIEKEYVEPDMVRELYEEGSAMLSERFETKYPLCNMFKLFMCAVCQVEIKPGEGISVHEGAPNQGKPRPWDGPFLCSSCQEKKEAMEGKRTSDRHNRGSD 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01932 465 CDD PP2Cc 69 331 IPR001932 -
Vivi3g01932 465 SMART PP2C_SIG_2 77 331 IPR001932 -
Vivi3g01932 465 SUPERFAMILY PP2C-like 69 331 IPR036457 -
Vivi3g01932 465 SMART PP2C_4 61 329 IPR001932 -
Vivi3g01932 465 Pfam Protein phosphatase 2C 95 318 IPR001932 -
Vivi3g01932 465 Gene3D - 58 338 IPR036457 -
Vivi3g01932 465 MobiDBLite consensus disorder prediction 1 44 - -
Vivi3g01932 465 ProSiteProfiles PPM-type phosphatase domain profile. 66 331 IPR001932 -
Vivi3g01932 465 FunFam probable protein phosphatase 2C 12 70 337 - -
Vivi3g01932 465 MobiDBLite consensus disorder prediction 14 40 - -
Vivi3g01932 465 PANTHER PROTEIN PHOSPHATASE 30 330 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01932 Vivi-Chr3 31780447 31787602 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01932 39 465 PP2C-type Phosphatase Gene Family AT1G47380 75.467 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01932 - - vvo:131660875 867.84