Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01925 ATGGTTACACTTGCAGCAATAGCAAGAAGCTTCCATTTTCAGAAACATTCTTTAATCAACATCACTACCATTGGTAAATCTTCAACAGCAGGACACTACTGGCTCAGGCCTGCTACTGCAGGAACAGGAGTCACACCACGTTATAGGCAAATTTGTGCAGCGGCACAACAGCGACCGACATGGCTCCCTGGACTTGATTCTCCAACTTATCTTGATGGAACTTTAGCTGGAGATTATGGGTTCGACCCACTTGGGCTTGGTGAGGATCCTGAAAGCTTAAAGTGGTATGTGCAAGCAGAATTGGTTCATTCTCGCTTTGCAATGCTTGGTGTCTTTGGAATTCTAGTCACAGATCTACTTCGCGTCGCAGGAGTTAGTACTATACCAGTTTGGTTTGAAGCTGGTGCAGTAAAATACGAGTTTGCGAACATAGGGACACTCGTCGCTGTTCAACTACTTTTGATGGGGTATGCGGAAACAAGAAGGTACATGGATTTTGTAAGTCCTGGATCTCAAGCTAAAGAAGGTTCCTTCTTTGGATTGGAAGCTTCATTGGAAGGCTTAGAGCCAGGATATCCTGGGGGTCCTCTGTTTAACCCTCTTGGTCTAGCTAAAGACAGTAAAAATGCTCATGGTTTGAAGCTTAAAGAGATCAAGAACGGACGACTTGCAATGGTGGCAATACTTGGCATCTTTGTACAAGCTTCAGTGACTCATGTTGGACCAATTGATAACCTTGTGGAGCATCTCTCCAATCCATGGCATAAAACTATTATTCAGACACTTGCTAGTTCTAGTTCTTAG 804 0.4403 MVTLAAIARSFHFQKHSLINITTIGKSSTAGHYWLRPATAGTGVTPRYRQICAAAQQRPTWLPGLDSPTYLDGTLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVFGILVTDLLRVAGVSTIPVWFEAGAVKYEFANIGTLVAVQLLLMGYAETRRYMDFVSPGSQAKEGSFFGLEASLEGLEPGYPGGPLFNPLGLAKDSKNAHGLKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSSS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01925 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 51 262 IPR001344 GO:0009765|GO:0016020
Vivi3g01925 267 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Vivi3g01925 267 SUPERFAMILY Chlorophyll a-b binding protein 54 264 - -
Vivi3g01925 267 Gene3D Chlorophyll a/b binding protein domain 60 267 - -
Vivi3g01925 267 FunFam Chlorophyll a-b binding protein, chloroplastic 59 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01925 Vivi-Chr3 31621262 31622823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01925 50 259 Chloroplast and Mitochondria Gene Families AT3G61470 48.341 8.06e-63 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01925 K08911 - gmx:100804934 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01925 3 31621262 31622823 Vivi3g01925 3 31621262 31622823 ECH