Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01916 ATGAATTTCAAGGGTTTTGGGAATGATCCGGGCGCCTCCGTGGCTGGCGGAGGTGGGAGGACGACGGCGGGGAGTTTTTCTCTGGCACGGCAGTCGTCGGTGTACTCGTTGACGATTGATGAATTTATGAATAGTATGGGAGGTTCTGGGAAAGATTTTGGATCAATGAACATGGATGAGTTGTTGAAGAACATTTGGACTGCGGAAGAGGTTCAAACAATGGGTGGTGAAGAGGCTGTTAGTAATCATTTGCAGAGGCAGGGCTCTTTGACACTGCCGCGGACGCTTAGTCAGAAGACAGTTGATGAAGTTTGGAAGGATATTTCGAAGGATTATGGTCCTAGTTTGGCTGCACCCCAGGCTCAGAGACAGCCAACTTTGGGGGAGATGACTTTGGAGGAGTTTTTGGTTAGAGCTGGTGTTGTTAGGGAAGATGCGAAACCGAATGATGGGGTTTTTCTTGATCTAGCGCGTGTTGGGAATAATAGTAATTTGGGTTTGGCTTTTCAGGCTCAGCAGATGAATAAAGTTGCTGGTTTTATGGGTGGTAATAATAGAATGAATGGTGGTACTAATGATGATCCACTTGTTGGTCTTCAGAGTCCTACAAATTTGCCGTTGAATGTGAATGGGATTAGATCAGCGAATCAGCAACAGATGCAGAGTTCAGTGTCTCAGCAACAAGTTCAGAATCAACAACTTCAGCAACATCAACTTCAGCAGCAACAACAGCAACAGCAACATCAGCAGCAGCAGCAGATATTTCCTAAGCAACCTGTTTTGAACTATGCAACTCAGATGCCTTTGTCTAGTAATCAAGCACTGAGAGGTGGAATTATGGGGCTTTCTCCTGATCAAGGCATGAATGCTAATCTTGTACAGGGTGGAGGGATTGGTATGGTTGGTTTGGCACCTGGGGCTGTTCAAATTGGTGCTGTATCACCGGCTAACCAAATATCTGGTGATAAACTTGGGAAGTCTAATGGTGATACTTCTTCTGTGTCGCCGGTTCCTTATGTATTTAATGGTGGTATGCGAGGAAGGAAGGGTAATGGAGCTGTGGAGAAGGTGATTGAGAGGAGGCAGAGAAGAATGATAAAGAATAGAGAGTCAGCTGCTAGATCCCGCGCTCGCAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTTGCAAAATTAAAAGAAGAGAATGAAGAACTTCAGAAAAAGCAGGAAGAAATCATGGAAATTCAGAAAAATCAAGTTAAAGAAATGATGAATTTGCAGCGAGAAGTCAAGAGAAAATGCTTAAGACGAACCCAAACCGGTCCATGGTAG 1317 0.4472 MNFKGFGNDPGASVAGGGGRTTAGSFSLARQSSVYSLTIDEFMNSMGGSGKDFGSMNMDELLKNIWTAEEVQTMGGEEAVSNHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGPSLAAPQAQRQPTLGEMTLEEFLVRAGVVREDAKPNDGVFLDLARVGNNSNLGLAFQAQQMNKVAGFMGGNNRMNGGTNDDPLVGLQSPTNLPLNVNGIRSANQQQMQSSVSQQQVQNQQLQQHQLQQQQQQQQHQQQQQIFPKQPVLNYATQMPLSSNQALRGGIMGLSPDQGMNANLVQGGGIGMVGLAPGAVQIGAVSPANQISGDKLGKSNGDTSSVSPVPYVFNGGMRGRKGNGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEIMEIQKNQVKEMMNLQREVKRKCLRRTQTGPW 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01916 438 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 358 415 - -
Vivi3g01916 438 Gene3D - 358 427 - -
Vivi3g01916 438 SMART brlzneu 356 421 IPR004827 GO:0003700|GO:0006355
Vivi3g01916 438 Coils Coil 229 254 - -
Vivi3g01916 438 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 358 409 IPR004827 GO:0003700|GO:0006355
Vivi3g01916 438 MobiDBLite consensus disorder prediction 185 205 - -
Vivi3g01916 438 SUPERFAMILY Leucine zipper domain 360 409 IPR046347 GO:0003700|GO:0006355
Vivi3g01916 438 CDD bZIP_plant_BZIP46 360 414 - -
Vivi3g01916 438 Pfam bZIP transcription factor 360 411 IPR004827 GO:0003700|GO:0006355
Vivi3g01916 438 Coils Coil 376 428 - -
Vivi3g01916 438 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 28 438 IPR043452 GO:0003700|GO:0045893
Vivi3g01916 438 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 363 378 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01916 Vivi-Chr3 31481764 31485652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01916 21 438 bZIP Transcription Factor Family AT4G34000 45.435 2.68e-93 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g01916 bZIP_1 3.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01916 K14432 - gmx:100819313 518.079