Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01888 ATGGAAGCAGGGGAAAACTGTTGCGTAAAAGTTGCGGTTCATGTACGGCCGTTAATCGCCGACGAGAAGCTTCAAGGATGCAAAGACTGTGTCACCGTCGTCTCCGGGAAGCCTCAGGTACAAATTGGTGCTCACTCATTTACATTTGATCATGTCTACGGAAGCACTGGTTCTCCCTCGTGTAACATGTTTGATGATTGTGTTGCTCCACTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTCCTGGCATATGGTCAGACAGGTTCTGGGAAAACGTACACCATGGGAACTGGCTTTAAAGAAGGTTTCCAAATAGGAATAGTACCACAAGTTATGAATGTTTTGTTCAACAAAATTGGGACCTTCAAGGACCAGATTGAATTTCAGTTGCATGTTTCCTTTATCGAGATTCTTAAAGAAGAAGTAAGAGATTTACTGGATCCCTCCTCCATGGGCAAACCAGAAACTACAAATGGACATGCAGGAAAAATGACATCTCCTGGGAAGCCGCCAATACAAATTCGTGAGACATCAAGTGGTGTTATAACCCTTGCAGGATCTACCGAAGTTAGTGTCACCACATTAAAAGAAATGGCTGCTTGCCTGGAACAAGGATCCCTGAGTAGAGCAACTGGTAGCACAAATATGAACAATCAATCCAGTCGATCTCATGCAATCTTCACCATCACATTAGAGCAAATGTGCAAGCCCAAGAATCCTAATGACAACTGCTTAAATGATAATATGAATGACGAGTATCTTTGTGCTAAGTTGCACTTGGTAGATCTTGCTGGATCAGAACGTGCTAAAAGAACAGGGTCTGATGGTATGCGTTTTAAGGAAGGCGTTCATATTAACAGAGGACTTCTAGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCATATAGGGACAGTAAACTTACTAGGCTTTTACAGGATTCACTTGGGGGTAACAGCAGAACTGTCATGATAGCCTGCATAAGTCCTGCTGACATTAATGCTGAGGAAACCCTAAACACTTTGAAGTATGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTTGTCAACAGAGATCCCATGTCCAGTGAGATGCTAAAAATGAGACAAAAACTGGAGTATTTGCAGGCAGAACTTTGTGCTCGTGCCGGTGGCTCATCTGGGGAAGTTCAGGGTCTTAAGGAAAGGATTGTTTGGCTTGAAGCTGCTAATGAAGATCTTTGCCGTGAACTTCATGAACACCGTAGTAGATGTTCTGTCTTAGAACAAAGTGAAAAGGATGGTTATGATGGTGGCACATGTATTGTGAAGACGGATGGGCTTAAGAGGACCTTACCTATAACGGCGACTGATTATCCAATGAATGAAACAGCAGGTGATTCAAGAGAAATTGAAGAAGTAGAAAAAGAATGGGAGCACAAACTTCTGCAAAATAGTATGGATAGAGAGTTGCATGAGTTGAATAAACGCTTGGAGCAGAAAGAGTTTGAGATGAAGTTGTTTGGAGTATCTGATGCAGAAATACTCAAGCAACGTTTTGGAAGGAAGATAATGGAACTTGAGGATGAGAAGAGAACAGTGCAGCGAGAAAGAGACTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAACTCTGATGGACAAACACAGAAATTAGAGGACACACATTCCCAAAAATTGAAAACACTTGAAGCACAAATTTTGGATCTGAAGAAGAAGCAAGAGAATCAAGTCCAGCTTATGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGGTTGCAAGATGAAATACAGTCTATAAAGGCCCAAAAGGTTCAGTTGCAACAAAAAATAAAACAAGAAGCAGAACAGTTTCGACAGTGGAAGGCTTCTAGAGAGAAAGAACTGTTGCAATTAAAGAAGGAGGGAAGAAAAAATGAATATGAAAAGCACAAGCTGCAAGCTTTAAATCAGCGCCAGAAAATGGTCCTTCAAAGGAAAACTGAAGAAGCTGCAATGGCAACCAAAAGGTTAAAGGAGTTGCTTGAAGCTCGTAAAACTTCCAGCCGAGACACTTTCGTTGCGACAAATGGAAATGGAACAAATGGGCAGAGTAACGAGAAGTCCTTACAACGGTGGCTTGACCATGAACTAGAAGTCACGGTGAAAGAACACGAAGTTCGTTTTGAATATGAGAAACAGAGCCAAGTGAGGGCTGCCCTTGCAGAGGAGCTAGCCATGTTGAAGCATGTAAGTGAGTTTGCTGCTAAGGGTCTAAGCCCACCAAGAGGAAAGAACGGATTTGCCAGGGCATCCTCCATGTCACCAAATGCAAGAATGGCTAGAATAGCTTCACTTGAGAACATGCTGAGTATATCCTCTAATTCACTTGTAGCAATGGCTTCTCAACTCTCCGAGGCAGAAGAACGAGAGAGGGCATTCACTAATCGTGGACGTTGGAATCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGGAGATGCTAGGTGCCAACTCTGGGAGAAGGACATGGAGATCAGAGAAATGAAAGATCAAATCAAAGAACTCGTCGGTCTTTTGCGGCAAAGTGAGATGAAGAGAAAGGAAGCTGAGAAGGATGTAAAAGGGAGAGAGCAAGCTGGCACAACCACATTGGCTACCCCAGTTTCTGGAAATTCTCCAAATTCATTGAAACAGTATACTGAAGATACGAAGGGACCTTTATCTCCAAGGTCTGTGCCAATACCAAGACAACTTAAATATACGCCAGGGGTTGCTAATGGCTTGACGAGGGAATCAGCAGCATTTGTTGATCAGGGTAGAAGGATGAAACCCATTGGGCAGCTGTCAATGAAAAAACTAGCAATTGTAGGACAAGCTTCTGGCAAGTTATGGAGGTGGAAAAGAAGCCATCATCAATGGCTACTACAATTCAAGTGGAAGTGGCAGAAACCATGGAGGCTTTCAGAATGGATTCGACACAGTGATGAAACAATCATGAGAGCAAGACCGCGCTCTCAGGCTTTGCCGCACATGTGA 3084 0.4274 MEAGENCCVKVAVHVRPLIADEKLQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSTGSPSCNMFDDCVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKEGFQIGIVPQVMNVLFNKIGTFKDQIEFQLHVSFIEILKEEVRDLLDPSSMGKPETTNGHAGKMTSPGKPPIQIRETSSGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMCKPKNPNDNCLNDNMNDEYLCAKLHLVDLAGSERAKRTGSDGMRFKEGVHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSSEMLKMRQKLEYLQAELCARAGGSSGEVQGLKERIVWLEAANEDLCRELHEHRSRCSVLEQSEKDGYDGGTCIVKTDGLKRTLPITATDYPMNETAGDSREIEEVEKEWEHKLLQNSMDRELHELNKRLEQKEFEMKLFGVSDAEILKQRFGRKIMELEDEKRTVQRERDCLLAEVENLAANSDGQTQKLEDTHSQKLKTLEAQILDLKKKQENQVQLMKQKQKSDEAAKRLQDEIQSIKAQKVQLQQKIKQEAEQFRQWKASREKELLQLKKEGRKNEYEKHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKTSSRDTFVATNGNGTNGQSNEKSLQRWLDHELEVTVKEHEVRFEYEKQSQVRAALAEELAMLKHVSEFAAKGLSPPRGKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVGDARCQLWEKDMEIREMKDQIKELVGLLRQSEMKRKEAEKDVKGREQAGTTTLATPVSGNSPNSLKQYTEDTKGPLSPRSVPIPRQLKYTPGVANGLTRESAAFVDQGRRMKPIGQLSMKKLAIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIMRARPRSQALPHM 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01888 1027 MobiDBLite consensus disorder prediction 880 932 - -
Vivi3g01888 1027 MobiDBLite consensus disorder prediction 150 176 - -
Vivi3g01888 1027 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi3g01888 1027 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi3g01888 1027 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi3g01888 1027 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi3g01888 1027 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1019 IPR027640 GO:0003777|GO:0007018
Vivi3g01888 1027 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi3g01888 1027 Gene3D Kinesin motor domain 2 391 IPR036961 -
Vivi3g01888 1027 Coils Coil 490 510 - -
Vivi3g01888 1027 Coils Coil 516 557 - -
Vivi3g01888 1027 Coils Coil 566 638 - -
Vivi3g01888 1027 FunFam kinesin-like protein KIN-4A isoform X1 2 391 - -
Vivi3g01888 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 393 IPR027417 -
Vivi3g01888 1027 CDD KISc_KIF4 7 364 - -
Vivi3g01888 1027 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vivi3g01888 1027 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi3g01888 1027 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi3g01888 1027 Coils Coil 861 895 - -
Vivi3g01888 1027 Coils Coil 671 691 - -
Vivi3g01888 1027 MobiDBLite consensus disorder prediction 895 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01888 Vivi-Chr3 30796298 30810098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01888 9 406 Calmodulin-binding Proteins AT5G65930 32.836 9.23e-53 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01888 - - gmx:100802585 1808.11