Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01882 ATGAACACTCCTCTAAAACACATTTCTGAATGCTTCATCAAACCACATCCCCCAATCGAAGACTCGAATCAAATATGCTATTTAGCACCTTGGGATATTTGCATGTTATCTGCCAACTATATCCAAAAAGGACTCCTCTTCAAAAAACCAACATCATCACTAGTTAATCAACCAGATTTCATCGACAATCTGTTGATAAAACTCAAACACTCTCTTTCTCTCACACTTTTCCATTTCTATCCCCTCTCAGGACGTCTTGTTACTCACAAAACCCAAGATCCTCCATCTTACACTATTTTTGTCGATTGCAAAAACAGTCCCGGAGCTAAATTTATCTATGCAACTTCAGATATCACCATAGATGATATCCTATCTCCCATTAACGTTCCACCCATTGTTCAATCGTTTTTTGATCACCATAAAGCAGTCAACCATGATGGTCACACCATGTCTTTGTTGTCTATTCAAGTCACTGAATTATTGGATGGTGTTTTCATAGGTTGTTCCATGAACCACTCTCTTGGTGATGGAACTGCTTATTGGAATTTCTTTAACACACTTTCTGAAATATTTCAAAATGATGCTAGTGTTCCTGTTCCCATTTCACACCAACCCATCCATAATAGGTGGTTTCCAGAAGGTTATGGTCCAATTATCAACCTTCCTTTCAAACATCACGACGAGTTTATTCACAGGTCTGAAGCACCTATTTTGAGAGAAAGAATCTTCCATTTCTCAGCCGAGTCTATAGCTAAACTTAAAGCAAAGGCTAACAAAGAATCCAAGACAACAAAAATCTCTTCTTTCCAATCATTGTCAGCACTAGTTTGGAGATCTATAACTCGTGCACGTCAACTACATCATGATCAGACAACAACTTGCAAATTGTCAACTACATCTAGAGTAGAAAGCTATGTGATCTAA 924 0.3788 MNTPLKHISECFIKPHPPIEDSNQICYLAPWDICMLSANYIQKGLLFKKPTSSLVNQPDFIDNLLIKLKHSLSLTLFHFYPLSGRLVTHKTQDPPSYTIFVDCKNSPGAKFIYATSDITIDDILSPINVPPIVQSFFDHHKAVNHDGHTMSLLSIQVTELLDGVFIGCSMNHSLGDGTAYWNFFNTLSEIFQNDASVPVPISHQPIHNRWFPEGYGPIINLPFKHHDEFIHRSEAPILRERIFHFSAESIAKLKAKANKESKTTKISSFQSLSALVWRSITRARQLHHDQTTTCKLSTTSRVESYVI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01882 307 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 301 - -
Vivi3g01882 307 Pfam Transferase family 8 297 - -
Vivi3g01882 307 Gene3D - 225 302 IPR023213 -
Vivi3g01882 307 Gene3D - 6 219 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01882 Vivi-Chr3 30689694 30691570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01882 68 301 Monolignol Biosynthesis Gene Families AT5G48930 29.644 1.11e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01882 - - vvo:131660849 635.95