Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01881 ATGAGCACCCCTTCTCTAAAATTCGTTTCTGAATGCTTCATCAAACCGCATCCCCCAATCAAAGACTCGAACCAAATCTGCTATTTAGCACCATGGGATATTTTAATGTTATCTGCACACTATATCCAAAAGGGCCTCCTCTTCAAGAAACCAGCATCATCACCAAACCAACAACACTTCATTGACAAACTCAAACACTCTCTTTCTCTCGCACTTTTCCATTTCTATCCTCTCTCTGGTCGTCTTGTTACTACACACAAAACCCAACACCCTCCTTCCTATACTGTTTTTATCGACTGCAAAAATAGTCCTGGTGCTAAATTTATCCATGCAACGTTAGATACAACCATAAATGATATCCTCTCCCCCATTTATGTCCCACCCATTGTTCATTCCTTCTTTGATCACCACAAAGCAGTTAACCATGATGGTCACACCATGTCTTTGTTGTCTATTCAAGTCACTGAATTATTGGATGGTGTTTTCGTAGGTTGTTCCATGAACCACTCTCTTGGTGATGGAACTGCTTATTGGAATTTCTTTAACGCGTTTTCTGAAATATTTCAAAATGACACTAATACTATTCCTCTTTCAATTTCACACCAACCCATCCATAATAGGTGGTTTCCGGAAGGTTATGGTCCAATTATTAACCTTCCTTTCGAACATCACGACGAGTTTATTCAAAGATATGAAGCACCGATTTTGAGAGAGAGAATCTTCCATTTTTCAGCAGAATCTATAGCAAAGCTGAAAGCAAAGGCTAACAAAGAGTCTAACACAAACAAAATCTCTTCTTTCCAATCTTTATCAGCACTAGTTTGGAGATCTATAACCCGTGCGCGTCAACTACAACATGATCAGAAAACAACTTGCAACTTGGCTATAAACAACCGAACGAGAATGGAACCGTCTCTTCCTGAGGAATATTTTGGGAATTCAATTCATGCAGTGAGTACTGATATGACGGTAAAGGAACTGCTAGAGAATGATCTAGGATGGGCAGCTTGGAAGGTTCATATGGCTGTTGCGAATCATGATGACAAAGTGGTGCGGGGATCGGTGGAAAAATGGTTAGAGTCGCCTATTGTGCTTCGAATGGACATGATATTGGATCCTAATACAGTTATGATGGGTAGTTCACCGAGGTTTAATATGTATGGAAATGAATTTGGAATGGGGAAAGCATTAGCAGTTAGAAGTGGTTATGCAAACAAATCAGATGGAAAAGTAACATCATATCCAGGACAAGAAGGAGGAGGGAGTATAGATCTTGAAGTATGTCTTTCACCAGATACAATGATGGTCTTGGAATCGGATGAAGAGTTCATGAACTCAGTTTCTTTGTTTAGTCCCCCCTTGTTCTAA 1368 0.3984 MSTPSLKFVSECFIKPHPPIKDSNQICYLAPWDILMLSAHYIQKGLLFKKPASSPNQQHFIDKLKHSLSLALFHFYPLSGRLVTTHKTQHPPSYTVFIDCKNSPGAKFIHATLDTTINDILSPIYVPPIVHSFFDHHKAVNHDGHTMSLLSIQVTELLDGVFVGCSMNHSLGDGTAYWNFFNAFSEIFQNDTNTIPLSISHQPIHNRWFPEGYGPIINLPFEHHDEFIQRYEAPILRERIFHFSAESIAKLKAKANKESNTNKISSFQSLSALVWRSITRARQLQHDQKTTCNLAINNRTRMEPSLPEEYFGNSIHAVSTDMTVKELLENDLGWAAWKVHMAVANHDDKVVRGSVEKWLESPIVLRMDMILDPNTVMMGSSPRFNMYGNEFGMGKALAVRSGYANKSDGKVTSYPGQEGGGSIDLEVCLSPDTMMVLESDEEFMNSVSLFSPPLF 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01881 455 Gene3D - 226 439 IPR023213 -
Vivi3g01881 455 FunFam Tryptamine hydroxycinnamoyl transferase 222 440 - -
Vivi3g01881 455 Gene3D - 6 216 IPR023213 -
Vivi3g01881 455 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 445 - -
Vivi3g01881 455 Pfam Transferase family 8 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01881 Vivi-Chr3 30686090 30687705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01881 48 438 Monolignol Biosynthesis Gene Families AT5G48930 27.711 4.52e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01881 - - gmx:100792511 671.003