Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01866 ATGAAAATCCAAATCTTCTTCTTCTTCTTCTTCTCCTTTCTTTTCTTATTTACCAAAACTATTTCATCATCATCAACAACAGACACACTCCAACAAGGCTCATCTCTTTCTGTTGAGAAACCAAATGACACTCTCATTTCATCCAACGGTGATTTCTCCGCCGGTTTCTTCCCGGTCGGAGACAACGCTTTCTGTTTCTCCGTTTACTTCACCAAATCCAATCAACCTGCCGTTGTTTGGATGGCCAACCGAGATCAACCCGTAAACGGAAAATACTCAAAACTCTCACTTTCTAAAAAAGGTAACCTCATTTTAACCGATGCAAAAAGAAAAAAATCACCATGGTCCATTTCAAATACTTCTCCTTTTCCTTTACTGTTAAAGCTTCAAAACAACGGCAACCTCGTTCTCGAAACGGTTAACAGCAACGTTACTGTCATTTGGCAAAGTTTTGATTCTCCAACAGATACTCTTCTTCTTGGACAACAAGTTACCGAACAATCAAGCTTGGTTTCTTCCAAAAGCGAAAAGAACTATTCCACGGGCTTCTATAAACTATATTACGACAACGATAACGCTCTTCGTCTTCTTTTCAAAAGTCCTTTGTTATCTAGCGTCTATTGGCCAGCACCTTGGCAACTACCAATTGATGCAGGAAGATCGACCTATAATGTTTCAAAAATCGCACTTCTCGATTCATTTGGTCATTTTGTTTCCTCTGATGCATTCGAATTTTTCACCAGTGATTATCCTAAAAGAGTTCTTAGATTACTCAAAATGGATCATGATGGGAACTTACGTGCTTACAGCTTCAATGAGAAAACTAAGACATGGGAAGTATCATGGCAAGCTCTTCCCGAATCATGTTCGGTTCATGGCCTTTGCGGAGAAAATAGCATGTGTACTTATCATCCTGTGAATGGAAGAACATGTTATTGTTTAAAAGGTTACAAGTTGAAGAATCATGATGATTGGACACAAGGGTGTGAGCCTGAGTTTAAGCCTTCTGATCTTTCTTGTAATCGCGGTGAGTCTTTCGGTTTTCTTCATCTTCAAAACATGGAATTGTATGGCTATGATTTGAAAGTAGTAAAAGTTACAAGCGTGAAGCAATGTCAACAAGTATGTTTGGATCTTTGTGAGAAATGTAAAGGTGTTCAATTCAAATTCAACCGCGATTCTACTTACGATTGTTTTCCAAAAACATTATTGTTCAATGGAAGAGATTCTCACAATATTGATGGAGATGTTTATCTGAAGTTGCCAAAAGCTACTCTATTAGATTCCACTATGCCAATTAAGCATACTCCTATAAAATGTTCCATTGAAAATTCTTCTCTAACCTTGAATAGATTCTACGAAAAACCGAGTAAAAACTCAACTTTGAGTTTCTTAACTTGGGTTGCATATGGAATAGGAGTGTTCGAAATTTCAATGATTTTGTTTGTTTGGTTCTTCTTGTTTAGAACCAATAAGAATCATGATGATAATGTTGATCAAATACAAAGACACCTTCTATCAGCAACAGGTTTTCAAAGATTCTCCTATTCCGAACTCAAAATCGCGACTAAGGGATTCACTAAAGAGATCGGTCGAGGAGGAGGCGGGATCGTTTACAAAGCCATACTCGATGATGACCGCGTCGCAGCTGTTAAACGATTAAACGAAGCGGATCAAGGAGAAGCCGAATTTCTAGCCGAGATAAGCACAATTGGCATGTTGAACCACATGAACTTGATTGACATGTGGGGATATTGCGTGGAAGGGAAACATAGGATTTTGGTTTATGAGTTCATGGAACATGGTTCTTTAGCCGAAAAGCTTTGTTCCAATTCACTTGATTGGAACAGAAGGTTTAACATAGCTGTCGGAACAGCGAAAGGTTTAGCTTATTTACATGAAGAGTGTTTAGAATGGGTTTTGCATTGTGATGTGAAGCCTCAGAATATTCTACTAGACACAAATTTTCAACCAAAAGTAGCTGATTTCGGTTTATCAAAGCTTTTGAATAGAGACGAACGTGATAGTTCAGCTTTTTCAAGGATAAGAGGGACAAGAGGATATATGGCACCAGAATGGGTTTATAACCTTAGAATCACTTCTAAGGTTGATGTTTATAGTTATGGGATTGTGTTGCTTGAAATGGTGAGTGGGAAGAGTCCAATGGGAATTCATAGTCTTGATAATAGTGGAGGTATAGAGAATCATAGGATGGTGAGCTGGGTTATGGATAAGGTGAAAAATGCTCCTACGACAATGTTTTGGATTGAGGAGATTGTTGATGGGAATTTGGAAGGGAAATATGATGTTAAGCAAGTTGAGAATTTGGTTAGAGTTGCTTTGAAGTGTGTGAAAGATGACATGAATGAAAGACCAACAATGAGTCAAGTTGTTGAGATGCTTCTTCAGTCACATGAAAAAGTTAGAGGACAAGGACAACCTCGTTAG 2448 0.3819 MKIQIFFFFFFSFLFLFTKTISSSSTTDTLQQGSSLSVEKPNDTLISSNGDFSAGFFPVGDNAFCFSVYFTKSNQPAVVWMANRDQPVNGKYSKLSLSKKGNLILTDAKRKKSPWSISNTSPFPLLLKLQNNGNLVLETVNSNVTVIWQSFDSPTDTLLLGQQVTEQSSLVSSKSEKNYSTGFYKLYYDNDNALRLLFKSPLLSSVYWPAPWQLPIDAGRSTYNVSKIALLDSFGHFVSSDAFEFFTSDYPKRVLRLLKMDHDGNLRAYSFNEKTKTWEVSWQALPESCSVHGLCGENSMCTYHPVNGRTCYCLKGYKLKNHDDWTQGCEPEFKPSDLSCNRGESFGFLHLQNMELYGYDLKVVKVTSVKQCQQVCLDLCEKCKGVQFKFNRDSTYDCFPKTLLFNGRDSHNIDGDVYLKLPKATLLDSTMPIKHTPIKCSIENSSLTLNRFYEKPSKNSTLSFLTWVAYGIGVFEISMILFVWFFLFRTNKNHDDNVDQIQRHLLSATGFQRFSYSELKIATKGFTKEIGRGGGGIVYKAILDDDRVAAVKRLNEADQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRILVYEFMEHGSLAEKLCSNSLDWNRRFNIAVGTAKGLAYLHEECLEWVLHCDVKPQNILLDTNFQPKVADFGLSKLLNRDERDSSAFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVLLEMVSGKSPMGIHSLDNSGGIENHRMVSWVMDKVKNAPTTMFWIEEIVDGNLEGKYDVKQVENLVRVALKCVKDDMNERPTMSQVVEMLLQSHEKVRGQGQPR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01866 815 ProSiteProfiles Protein kinase domain profile. 524 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01866 815 PANTHER OS07G0415500 PROTEIN 9 803 - -
Vivi3g01866 815 SMART ntp_6 343 421 IPR003609 -
Vivi3g01866 815 Gene3D Phosphorylase Kinase; domain 1 488 598 - -
Vivi3g01866 815 Gene3D - 22 153 IPR036426 -
Vivi3g01866 815 CDD PAN_AP_plant 337 422 - -
Vivi3g01866 815 Pfam S-locus glycoprotein domain 251 320 IPR000858 GO:0048544
Vivi3g01866 815 Pfam Protein kinase domain 528 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01866 815 CDD STKc_IRAK 530 801 - -
Vivi3g01866 815 PIRSF SRK 1 813 IPR024171 GO:0004674
Vivi3g01866 815 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Vivi3g01866 815 SMART serkin_6 524 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01866 815 FunFam Serine/threonine-protein kinase 599 809 - -
Vivi3g01866 815 Gene3D Transferase(Phosphotransferase) domain 1 599 813 - -
Vivi3g01866 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 210 IPR036426 -
Vivi3g01866 815 SMART blect_4 36 154 IPR001480 -
Vivi3g01866 815 ProSiteProfiles PAN/Apple domain profile. 340 422 IPR003609 -
Vivi3g01866 815 CDD B_lectin 40 154 IPR001480 -
Vivi3g01866 815 FunFam S-receptor-like serine/threonine-protein kinase 492 598 - -
Vivi3g01866 815 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Vivi3g01866 815 Pfam D-mannose binding lectin 78 167 IPR001480 -
Vivi3g01866 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Vivi3g01866 815 SUPERFAMILY Protein kinase-like (PK-like) 503 801 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01866 Vivi-Chr3 30144239 30147179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01866 481 801 Receptor kinase-like Gene Family AT1G60800 38.788 1.44e-66 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi3g01866 Pkinase 4.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01866 - - gmx:100816469 1111.67