Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01865 ATGCCCTTGATCTTTCTCTCTTTGCTTTTGTTTCTAAAACTTTCATCATCTTCAGCATTTGATACTATGAATCAAGGTTCATCTCTCTCAGTGGAACAACCAAAAGATATCATAGTATCACAAAATGGCATGTTCTGTGCTGGCTTCTATGCTGTTGGTGAAAATGCATATTCCTTTGCCATTTGGTTTTCCGAACCAAATCACCAAACAAAAAACCTTACCCTAGTATGGAATGCAAACCGTAACCAACCCGTCAACGGAAAAGGCTCAAAACTTAACCTTCTCGACAGTGGTAACCTTGTCTTAAGGGACACAGATGCGTCTCTTGTTTGGTCCACAAGCACTGTTTCACTCTCTTCTGTTGAACTCGTTCTTTTAAACACCGGTAACCTCGTTTTAAGCGAAGTAGATGGGGTTACTTTGTGGCAAAGCTTTGGTTCTCCTACCGATACGCTTTTGCCGCAACAAGTTTTCAATAGACATTCAAGAATAGTTTGTTCAAGAAGTGAAACAAATAAGTCAGCTGGTTTTTATACGTTGTATTTCGACTTCGACAACATTCTCCGTCTTCTTTACGACGGTCCTGAAGTATCGAGCATTTACTGGCCTGATCCTTGGCTTACTGATTGGGCTGCTAATAGGGCTGGTTACAATGACAGTAAAGTTGCGGTTTTGAACACTCTTGGTAACTTCAGTTCATCAGATGATTTCTATTTCACGACATCTGATTATGGAGATGAACTGATGCAGAGAAGACTAAGACTTGATCCTGACGGAAACCTTCGCAGTTATAGTCGAAAACAAAGCGGAGAAAAGTGGTATGTTTCATGGCAAGCCAAATCAAGACCTTGTAGAATTCATGGTGTTTGTGGTGTAAATAGTTTGTGCTCTTATTATAATGACAGTGTAAAATGTTCTTGTCTTCCGGGATACCAAATGAAGAATCCTCAAGATTGGGCTTATGGATGTGAACCAGAATTTTCTCTGACATGCAATCAAACTCAATCTGAGTTTCTAGTTGTATCCAATGTGGAGTTATATGGCTATGATTATGGAATCTTGGAAAATTACACACTTGCTCAGTGCCAAGATTTTTGTTTGCAATTCTGCAATTGCAAAGGCATTCAATATACCTATGTCATAGGCGGTAATGGTATACCTGATACTCATTCATGTTACCCGAAGTTGCAGCTGCGAAACGCATATCGAATACCGTATTTCAAGGCTGATTTGTACTTGAAACTTCCGGCAAACAGTTCATACACTTTCAAGGAAACACTGGATGTTGAGAACAAACTCACTTGTCCTGCGAATCCGAAAGCAACAGTTCTTCAAAGATCATTCAACGAAGTTCGAGATGGAAGGTATATTAGGTTTTTGCTTTGGTTTGTAGGAGGAATGGGAGGAGTAGAAATCTTGTGCATATTTTTGATGTGGTTTTTCTTTGTAAGATCAAAGAATAATTCAGATGCAAGAGTGTATAATAATATGTCCATAATTGGTTTTAGAAAATTCAGTTATTCTGAATTGAAAAAAGCAACAAAAAATTTTAGTCAAGAGATTGGAAAAGGTGCAGGAGGGGTTGTATACAAAGGTTTACTGTTGGACGAACGAGTCATCGCGGTGAAGAGACTCACAGAAGCTAATCAAGGCGAAGAACAGTTTCTCGCGGAAGTAAGTAGCATTGGAAGGCTTAACCATATGAATTTGATTGAACTGTGGGGATATTGTGCAGAAGGGAAACAAAGAATGCTTGTGTATGAGTTCATGGAAAATGGTTCTTTAGCCGAACATTTAAGGTCTAGTGCATTGGATTGGACAAAGAGATTTGACATAGCTTTAGGTACAGCAAGAGGTTTGGCTTATATTCATGAAGAGTGTTTGGAGTGGATTTTGCACTGTGATGTGAAGCCACAGAACATTCTTTTGGATTCTGATTATCAACCAAAGGTGGCAGATTTTGGATTGTCCAAGCTAAGAGACAGGAGTGATGCTAAATTCTCTAGTTTTTCGAAAATACGAGGAACAAGAGGCTATATGGCTCCAGAGTGGATATTGAATCATTCAATAACATCTAAGATTGATGTTTATAGCTATGGAGTGGTTGTGTTGGAAATAATAACAGGAAAGAGTGCAACCAAGGATGTTGATATGGGAGATGGAGAAGAGAAACAAGGTTTGGTTATATGGTTGAGAGAGAAAAGGTATACAAGAAGTGCATGGGTGAATGAAATTATAGATCCTACCATAGAAGGAGGTTATGATGAAAAGGAAGTTGAAGCTTTGGCTGAAGTGGCTTTGCAATGTGTAGAGGAGGATAAGGAGAAAAGGCCAACCATGAGTCATGTGGTAGAAGTGCTTCTGAAAATAAGCCGTGAACCTGAAAATGATAATCAAGAATCAGCAAGTGGCTAG 2415 0.3909 MPLIFLSLLLFLKLSSSSAFDTMNQGSSLSVEQPKDIIVSQNGMFCAGFYAVGENAYSFAIWFSEPNHQTKNLTLVWNANRNQPVNGKGSKLNLLDSGNLVLRDTDASLVWSTSTVSLSSVELVLLNTGNLVLSEVDGVTLWQSFGSPTDTLLPQQVFNRHSRIVCSRSETNKSAGFYTLYFDFDNILRLLYDGPEVSSIYWPDPWLTDWAANRAGYNDSKVAVLNTLGNFSSSDDFYFTTSDYGDELMQRRLRLDPDGNLRSYSRKQSGEKWYVSWQAKSRPCRIHGVCGVNSLCSYYNDSVKCSCLPGYQMKNPQDWAYGCEPEFSLTCNQTQSEFLVVSNVELYGYDYGILENYTLAQCQDFCLQFCNCKGIQYTYVIGGNGIPDTHSCYPKLQLRNAYRIPYFKADLYLKLPANSSYTFKETLDVENKLTCPANPKATVLQRSFNEVRDGRYIRFLLWFVGGMGGVEILCIFLMWFFFVRSKNNSDARVYNNMSIIGFRKFSYSELKKATKNFSQEIGKGAGGVVYKGLLLDERVIAVKRLTEANQGEEQFLAEVSSIGRLNHMNLIELWGYCAEGKQRMLVYEFMENGSLAEHLRSSALDWTKRFDIALGTARGLAYIHEECLEWILHCDVKPQNILLDSDYQPKVADFGLSKLRDRSDAKFSSFSKIRGTRGYMAPEWILNHSITSKIDVYSYGVVVLEIITGKSATKDVDMGDGEEKQGLVIWLREKRYTRSAWVNEIIDPTIEGGYDEKEVEALAEVALQCVEEDKEKRPTMSHVVEVLLKISREPENDNQESASG 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01865 804 SUPERFAMILY Protein kinase-like (PK-like) 494 788 IPR011009 -
Vivi3g01865 804 ProSiteProfiles Protein kinase domain profile. 515 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01865 804 CDD EGF 283 312 - -
Vivi3g01865 804 Pfam Protein kinase domain 518 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01865 804 Pfam S-locus glycoprotein domain 230 314 IPR000858 GO:0048544
Vivi3g01865 804 SMART blect_4 26 148 IPR001480 -
Vivi3g01865 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Vivi3g01865 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 796 - -
Vivi3g01865 804 SMART ntp_6 333 415 IPR003609 -
Vivi3g01865 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 205 IPR036426 -
Vivi3g01865 804 Gene3D Phosphorylase Kinase; domain 1 481 589 - -
Vivi3g01865 804 PANTHER OS07G0415500 PROTEIN 6 790 - -
Vivi3g01865 804 SMART serkin_6 515 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01865 804 ProSiteProfiles Bulb-type lectin domain profile. 14 146 IPR001480 -
Vivi3g01865 804 CDD PAN_AP_plant 327 416 - -
Vivi3g01865 804 FunFam S-receptor-like serine/threonine-protein kinase 484 589 - -
Vivi3g01865 804 ProSiteProfiles PAN/Apple domain profile. 331 416 IPR003609 -
Vivi3g01865 804 PIRSF SRK 1 803 IPR024171 GO:0004674
Vivi3g01865 804 Gene3D - 16 147 IPR036426 -
Vivi3g01865 804 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Vivi3g01865 804 ProSiteProfiles EGF-like domain profile. 280 317 IPR000742 -
Vivi3g01865 804 CDD STKc_IRAK 521 790 - -
Vivi3g01865 804 Gene3D Transferase(Phosphotransferase) domain 1 590 803 - -
Vivi3g01865 804 Pfam D-mannose binding lectin 74 162 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01865 Vivi-Chr3 30137063 30139550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01865 389 787 Receptor kinase-like Gene Family AT5G45780 36.697 2.13e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi3g01865 Pkinase 3.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01865 - - gmx:100792388 1057.36