Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01864 ATGCATTTGATCCTTCTCCCCTTGCTTTTGTTTCTACAACTTTCACCATCTTCTGGATTGGATACTATGAATCAAGGCTCATCCCTCTCAGTGGAAGAACCAAAAGATATCATAGTATCACAAAATGGCATGTTCTGTGCTGGCTTCTATGCTGTTGGTGAAAATGCATATTCCTTTGCCATTTGGTATTCCGAACCAAATCACCAAACAGAAAACCTTACCTTAGTATGGAATGCAAACCGTAACCAACCCGTCAACGGAAGAGGCTCAAAACTCCATCTTCTCAACAATGGTAACCTTGTCTTAAAAGATGCTGATGAGTCTCTCGTTTGGTCCGCAAACACTGTCTCACTCTCTTCTATGCATCTCGTTCTTTTGAACACAGGTAACCTCGTTTTACGCGAAGTAAATGGTGTTACTTTATGGCAAAGCTTTGATTCTCCTACTGATACGCTTCTGCCACAACAAGTTTTCAACAGACATTCCAGAATTGTTTGTTCAAGAAGCGAAACAAACAAGTCGTCTGGTTTTTATATGCTGTATTTCGACAACGACAACATTCTTCGTCTTCTTTACGATGGTCCTGAAGTATCGAGCATTTATTGGCCGGATCCTTGGCTTACTGTTTGGGATGCTAAAAGGGCTGCTTACAATAACAGTAGAGTTGCGGTTTTGAACACTCTTGGTAACTTTAGTTCATCAGACGATTTCAATTTCATGACATCTGATTATGGAGATGCAGTGATGCAGAGAAGACTTAGACTTGATCCTGACGGAAACATTCGCACTTACAGTCGAAAACAAAGCGGAGAAAACTGGTATATTTCATGGCAAGCCAAATCAAGACCTTGTAGAATTCATGGTGTTTGTGGTGTAAATAGTTTGTGCTCTTATTATAATGACAGTGCGAAATGTTGTTGTCTTCCGGGATACAAAATGAAGAATCCTCTAGATTGGGCTTATGGATGTGAGCCAGAATTCTCTCTGCCATGCAAGAAAACTCAGTCTCAGTTTCTAGTTATATCCAATGTGGAGTTGTTCGGTTATGATTATGGAATCTTTGTAAATTACACACTTGCTCGGTGTAAAGATTTATGCTTACAATTATGCAATTGCAAAGGTATTCAATATGCCTATGTCAAAGCAGGTAGTGGTATACCTGATACTTACACATGTTACCCGAAGCTGCAGCTGCGAAACGGGTATCGAATACCTTATTACAACGCTGATTTGTATTTGAAACTGCCGGCAAACAGTTCATACACTTACAAGGAATCAATGAATGATAAGTACAAACTTGCTTGTCCTACAAATCCGAAACCAATAACTCTTGAAAGATCATACGAAGAAGTTCCCGAAGGAAGGTATATTAAGTTTTTGCTTTTGTTTGTTGGGGGAATGGGTGGACTAGAAATCTTGTGCATATTTTTTATACGATTTTTCTTTGTAAGAACAAAAAATAGTTCAAGCACAAGAGTGTATAATAGTATGTTCATAAATGATTTTAGAAAATTCAGCTATTCTGAATTGAAAAAAGCAACAAAAAATTTTAGTCAAGAGATTGGAATAGGTGCAGCAGGAGTTGTATACAAAGGATTACTGTTGGATGAACGAGTCATCGCGGTGAAGAGACTCACAGAAGCTAATCAAGGCGAAGAACAGTTTCTCGCGGAAGTAAGTAGCATCGGAAGGCTTAACCATATGAATTTGATAGAATTGTGGGGGTATTGTGCAGAAGGAAAACACAGAATGCTTGTGTATGAGTTCATGGAAAATGGTTCTTTAGCACAGCATTTAAGGTCTAGTGGATTGGATTGGCCAAAGAGATTTGACATAGCTTTAGGTACAGCAAGAGGTTTGGCTTATATTCATGAAGAGTGTTTGGAGTGGATTTTGCATTGTGATGTGAAGCCACAAAACATACTTTTGGATTCTGATTATCAGCCAAAGGTGGCAGATTTTGGATTGTCAAAGCTAAGAGACAGGAGTGATGCTAAATTTTCTAGTTTTTCGAAAATACGAGGAACAAGAGGTTATATGGCTCCTGAGTGGATATTGAATCATTCAATAACATCTAAGATTGATGTTTATAGTTATGGAATGGTTGTGTTGGAAATTATAACAGGAAGGAGTGCAACAAAACATGTTGATATGGGAGAGGGAGAAGAGAAACAAGGCTTGGTTATATGGCTGAGAGAGAAAAGATATACAAGAAGTGCATGGGTTAGTGAAATTATAGACCCTACCATAGAAGAAGGTTATGACGAAAGTGAAGTTGAAGCTTTGGCTGAAATGGCTTTGCAATGTGTTGAGGAAGATAAGGACAAAAGACCTACCATGAGTCATGTGGTGGAAGTGCTTCAGAAATTGAGCCGTGAAAATGAGCTGTGA 2391 0.3873 MHLILLPLLLFLQLSPSSGLDTMNQGSSLSVEEPKDIIVSQNGMFCAGFYAVGENAYSFAIWYSEPNHQTENLTLVWNANRNQPVNGRGSKLHLLNNGNLVLKDADESLVWSANTVSLSSMHLVLLNTGNLVLREVNGVTLWQSFDSPTDTLLPQQVFNRHSRIVCSRSETNKSSGFYMLYFDNDNILRLLYDGPEVSSIYWPDPWLTVWDAKRAAYNNSRVAVLNTLGNFSSSDDFNFMTSDYGDAVMQRRLRLDPDGNIRTYSRKQSGENWYISWQAKSRPCRIHGVCGVNSLCSYYNDSAKCCCLPGYKMKNPLDWAYGCEPEFSLPCKKTQSQFLVISNVELFGYDYGIFVNYTLARCKDLCLQLCNCKGIQYAYVKAGSGIPDTYTCYPKLQLRNGYRIPYYNADLYLKLPANSSYTYKESMNDKYKLACPTNPKPITLERSYEEVPEGRYIKFLLLFVGGMGGLEILCIFFIRFFFVRTKNSSSTRVYNSMFINDFRKFSYSELKKATKNFSQEIGIGAAGVVYKGLLLDERVIAVKRLTEANQGEEQFLAEVSSIGRLNHMNLIELWGYCAEGKHRMLVYEFMENGSLAQHLRSSGLDWPKRFDIALGTARGLAYIHEECLEWILHCDVKPQNILLDSDYQPKVADFGLSKLRDRSDAKFSSFSKIRGTRGYMAPEWILNHSITSKIDVYSYGMVVLEIITGRSATKHVDMGEGEEKQGLVIWLREKRYTRSAWVSEIIDPTIEEGYDESEVEALAEMALQCVEEDKDKRPTMSHVVEVLQKLSRENEL 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01864 796 SMART serkin_6 515 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01864 796 Gene3D Transferase(Phosphotransferase) domain 1 590 796 - -
Vivi3g01864 796 PIRSF SRK 1 796 IPR024171 GO:0004674
Vivi3g01864 796 FunFam Putative receptor-like protein kinase 590 795 - -
Vivi3g01864 796 PANTHER OS07G0415500 PROTEIN 6 789 - -
Vivi3g01864 796 CDD B_lectin 38 148 IPR001480 -
Vivi3g01864 796 ProSiteProfiles Bulb-type lectin domain profile. 20 146 IPR001480 -
Vivi3g01864 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Vivi3g01864 796 Pfam S-locus glycoprotein domain 230 314 IPR000858 GO:0048544
Vivi3g01864 796 Pfam Protein kinase domain 518 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01864 796 CDD PAN_AP_plant 327 416 - -
Vivi3g01864 796 Gene3D Phosphorylase Kinase; domain 1 480 589 - -
Vivi3g01864 796 SMART blect_4 26 148 IPR001480 -
Vivi3g01864 796 Pfam D-mannose binding lectin 74 163 IPR001480 -
Vivi3g01864 796 FunFam S-receptor-like serine/threonine-protein kinase 484 589 - -
Vivi3g01864 796 ProSiteProfiles Protein kinase domain profile. 515 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01864 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 205 IPR036426 -
Vivi3g01864 796 Gene3D - 17 146 IPR036426 -
Vivi3g01864 796 FunFam Putative receptor protein kinase ZmPK1 17 147 - -
Vivi3g01864 796 SUPERFAMILY Protein kinase-like (PK-like) 490 787 IPR011009 -
Vivi3g01864 796 CDD STKc_IRAK 521 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01864 Vivi-Chr3 30118482 30121301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01864 437 795 Receptor kinase-like Gene Family AT5G45780 37.500 4.05e-68 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi3g01864 Pkinase 2.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01864 - - gmx:100792388 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01864 3 30118482 30121301 Vivi3g01864 3 30118482 30121301 ECH