Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01849 ATGATGGAGATCGAGGAAAAACGAAAACCGGCTATTGATTACATTGAAAGAGTTCAGAGATGCATGATGACTACAAACATGAGAGAAAAATTGGTTGATTGGCTAGTTGAGGTTGCAGATGTATACAAACTTTTACCAGAAACTCTTCATCTAGCTGTTTCCTATATTGACAGATTCCTATCTATCCAATCTCTCAATACATCCAAGCTTCAGTTGCTTGGGATTTCTGCTATGCTCATTGCGTCCAAGTATGAAGAAGTCAATCCAACAAGAGCGGTACAGTTCTGCCAAATTACTACCTATGAACTGCATGAGGTTTTAGAAATGGAAGCTCGCATACTCAAGTCCCTAAATTATGAAATGGGAAATCCTAATGTCATCACATTTTTAAGGCATGGATTTTTTTTTTCATATCTTAAATTTGAATATCTAAACTTTGCTACTTCCCATTCCCAGTTTAAATATTTGTGCAACTATCTTGCCGATTTGAGCCTGCTTGACTACGAGTGTCTACAATTTAAGCCTTCTACATTGGCTGCCTCCGTTATATTTCTGGCCAAATTTATTATCCGGCCTCGAGTAAATCCTTGGACTTTGTCCCTCCATGAATCTTTGGGTTATGGATCTGATGATTTGGAAGATTGTGCTACCATTCTACATGATTTGTATTTGTCAAGAAGGGCAGCATCCTTGAAAACTGTCCGTGACAAATACAAGCGGAGCAAGTACAAATGTGTAGCAAACTTGTCTTCCCCGCCTGAGCTGCCAGAAAGTTACTTTGAAGATGTTCATGCCTTCTACCAGTGCAATGGAGGCGCGAACATCACGACAGACGATGAGTGGGATTGA 849 0.3981 MMEIEEKRKPAIDYIERVQRCMMTTNMREKLVDWLVEVADVYKLLPETLHLAVSYIDRFLSIQSLNTSKLQLLGISAMLIASKYEEVNPTRAVQFCQITTYELHEVLEMEARILKSLNYEMGNPNVITFLRHGFFFSYLKFEYLNFATSHSQFKYLCNYLADLSLLDYECLQFKPSTLAASVIFLAKFIIRPRVNPWTLSLHESLGYGSDDLEDCATILHDLYLSRRAASLKTVRDKYKRSKYKCVANLSSPPELPESYFEDVHAFYQCNGGANITTDDEWD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01849 282 SMART cyclin_7 133 221 IPR013763 -
Vivi3g01849 282 SMART cyclin_7 33 115 IPR013763 -
Vivi3g01849 282 FunFam Cyclin A1 110 248 - -
Vivi3g01849 282 SUPERFAMILY Cyclin-like 1 121 IPR036915 -
Vivi3g01849 282 ProSitePatterns Cyclins signature. 28 59 IPR006671 -
Vivi3g01849 282 Pfam Cyclin, N-terminal domain 3 121 IPR006671 -
Vivi3g01849 282 Gene3D - 1 248 - -
Vivi3g01849 282 Gene3D - 10 122 - -
Vivi3g01849 282 PANTHER CYCLINS 3 244 IPR039361 -
Vivi3g01849 282 Pfam Cyclin, C-terminal domain 124 251 IPR004367 -
Vivi3g01849 282 SUPERFAMILY Cyclin-like 143 253 IPR036915 -
Vivi3g01849 282 PIRSF Cyclin_A_B_D_E 1 264 IPR046965 GO:0016538|GO:0044772
Vivi3g01849 282 SMART Cyclin_C_2 124 252 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01849 Vivi-Chr3 29955956 29957567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01849 1 264 Core Cell Cycle Gene Families AT5G43080 50.000 1.40e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01849 K06627 - gmx:100787417 300.056