Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01846 ATGGAGAGTGGTGGCTCAATGAAAAGAACAACCAGCAATGAATATGAATCACCTTTTACTCCTCTTGATCCAAAAAGGCCGAGAGTTGTTTCGGATGTTCCTCGTGGTTTTCGGCCTATAAATCTAGATGTTCCTCCTGGTTTTCTGCCTATACAGATTTCCAATTTGGATGAGCCAGTTTGTAACAGAAGAACCAATGCCAAACGTGACAATCAACATATTGATGAGCCTTACGTATCCGACATCTCCGAATATCTTTGCATGATGGAGATCGAGGACAAACGAAAACCGGCTATTGATTACATTGAAAAAGTTCAGAGATGCATGACTACAAACATGAGAGGAAAATTGGTTGATTGGTTAGTTCAGGTTGCAGATACATACAAACTTCTCCCAGAAACTCTTCATCTAGCTGTTTCCTATATTGACAGATTCCTATCTATTCAATCTCTCAATAAATCCAAGCTTCAGTTGCTTGGTATTTCAGCTATGCTCATTGCGTCCAAGTATGAAGAAGTCAATCCAACAAGAGCGGTAGAATTCTGCCAAATTACTACCTATGAGCTGCATGAGGTTTTAGAAATGGAAGCTCGCATACTCAAGTCCCTAAATTATGAAATGGGAAACCCTAATGTCATCACATTTTTAAGGACGTTTGCTGTGATTGCTTGTGAGAATCAAACGACTTCCCATTCACAGTTTAAATATTTGTGCAACTATCTTGCCGATTTGAGCCTGCTTGACTACGAGTGTCTACAATTCAAACCTTCTACATTGGCTGCCATCTTATTTCGATGTACACTTTGTCCCCTCCATGAATCTTTGGGTTATGGATCTGATGATTTGGAAGATTGTGCTACCATTCTACATGAGTTGTATTTGTCAAGAAGGGCAGCATCCTTGAAAACTGTTCGCAATAAATACAAGCTGCGCAAGCAAACTTGCCTTCCCCCACCTGAGCTGCAAGAAAGTTACTTTGAAGATGTTCATGCCTCTTACAAGTGCAATACAGACGTGAACATTGCGACAGACGATGAGTGGGATTGA 1047 0.4059 MESGGSMKRTTSNEYESPFTPLDPKRPRVVSDVPRGFRPINLDVPPGFLPIQISNLDEPVCNRRTNAKRDNQHIDEPYVSDISEYLCMMEIEDKRKPAIDYIEKVQRCMTTNMRGKLVDWLVQVADTYKLLPETLHLAVSYIDRFLSIQSLNKSKLQLLGISAMLIASKYEEVNPTRAVEFCQITTYELHEVLEMEARILKSLNYEMGNPNVITFLRTFAVIACENQTTSHSQFKYLCNYLADLSLLDYECLQFKPSTLAAILFRCTLCPLHESLGYGSDDLEDCATILHELYLSRRAASLKTVRNKYKLRKQTCLPPPELQESYFEDVHASYKCNTDVNIATDDEWD 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01846 348 Gene3D - 81 312 - -
Vivi3g01846 348 SMART Cyclin_C_2 210 319 IPR004367 -
Vivi3g01846 348 PANTHER CYCLINS 69 310 IPR039361 -
Vivi3g01846 348 MobiDBLite consensus disorder prediction 1 27 - -
Vivi3g01846 348 SUPERFAMILY Cyclin-like 187 333 IPR036915 -
Vivi3g01846 348 SUPERFAMILY Cyclin-like 70 207 IPR036915 -
Vivi3g01846 348 Pfam Cyclin, C-terminal domain 210 312 IPR004367 -
Vivi3g01846 348 FunFam G2/mitotic-specific cyclin 97 208 - -
Vivi3g01846 348 Pfam Cyclin, N-terminal domain 82 207 IPR006671 -
Vivi3g01846 348 ProSitePatterns Cyclins signature. 114 145 IPR006671 -
Vivi3g01846 348 SMART cyclin_7 214 291 IPR013763 -
Vivi3g01846 348 SMART cyclin_7 119 201 IPR013763 -
Vivi3g01846 348 MobiDBLite consensus disorder prediction 1 18 - -
Vivi3g01846 348 Gene3D - 97 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01846 Vivi-Chr3 29892050 29893850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01846 41 329 Core Cell Cycle Gene Families AT1G47210 45.161 1.95e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01846 K06627 - gmx:100786875 284.263