Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01832 ATGGTAATCACAAACTTCAACGGAGCCGGCGTCGGATTTGGTTTCGGTGTTGGTTGCGGCTTCGGTGTAGGATGGGGTTTCGGAGGTATGCCATTGAACTTCTTGGGTCTTGGTGCAGGTGGAGGCTGTGGCGTTGGAGTAGGACTTGGTTGGGGTTTTGGTACTGCTTATGGTAGCAGGTATAGGTTGTCAAGGGTAACATTTCAAGGAATCGAATTTGATAGTAAGGAGAAAAGTGGTAGCACGGAGTTATCAAAACCCAGTCCAGAAATAAGAATTTTCACCCTCTCACAAATCTCTCAACACAAGTCCAACAAAAACTGTTGGCTTGTCATCAACGGCAGAGTGTTGGACGTGACGAAGTTTTTGGAGGAACATCCGGGAGGAGAAGAGGTGATTCTAGAGGTTGCAGGGAAAGATGCAACAAAGGAGTTTGATGCTGTTGGACATAGTAAAGCAGCTCAAAAGTTAGTCCTGAAACACCAAGTTGGTGTCCTTGAAGGTGCCAAGGTTGAAAAGGTTTATGATGATAACGCTGTTGTTGTGGAAAAGGAATTTAAGAGGGAAGAAATGAGTGCTTTTGTAGTCAAAGATGATACTAGTTCAAAAACTGCTACATTTTTGCAGTTCTTTGTTCCTGTCATTTTTGCTTGTGTCTATTTTGGTTACAGGGTCATCACCACAGGAGACACTGTTGTCTAG 702 0.4402 MVITNFNGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGVGLGWGFGTAYGSRYRLSRVTFQGIEFDSKEKSGSTELSKPSPEIRIFTLSQISQHKSNKNCWLVINGRVLDVTKFLEEHPGGEEVILEVAGKDATKEFDAVGHSKAAQKLVLKHQVGVLEGAKVEKVYDDNAVVVEKEFKREEMSAFVVKDDTSSKTATFLQFFVPVIFACVYFGYRVITTGDTVV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01832 233 Pfam Cytochrome b5-like Heme/Steroid binding domain 95 166 IPR001199 -
Vivi3g01832 233 PANTHER CYTOCHROME B5 77 226 - -
Vivi3g01832 233 FunFam Cytochrome b5 type B 88 171 - -
Vivi3g01832 233 Gene3D - 85 174 IPR036400 -
Vivi3g01832 233 SMART Cyt_b5_2 94 167 IPR001199 -
Vivi3g01832 233 PRINTS Cytochrome B5 signature 126 140 IPR001199 -
Vivi3g01832 233 PRINTS Cytochrome B5 signature 141 148 IPR001199 -
Vivi3g01832 233 PRINTS Cytochrome B5 signature 116 126 IPR001199 -
Vivi3g01832 233 PRINTS Cytochrome B5 signature 154 166 IPR001199 -
Vivi3g01832 233 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 87 177 IPR036400 -
Vivi3g01832 233 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 91 167 IPR001199 -
Vivi3g01832 233 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 122 129 IPR018506 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01832 Vivi-Chr3 29593201 29600462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01832 92 227 NADPH P450 reductases AT5G48810 42.647 3.93e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01832 - - psat:127088049 363.999