Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01793 ATGGAGAATCAAGTGAAAGATGAAGAGTCACAACAGCATCAATTTGGTGGTGTATCAGAAGATGAGCATGTGGGGTTATTGATTCAGAAAGAGGTTTCCTTTGGGTTCAAAAAAGATGGAATTTTGATGTTTGATGAATCCTTGAAACGTGCTCGTTTCAATGCTATCAATTGGATTTTCAAAACAACAGAAGCATTGGATTTTCACTTTCAAACTGCTTATTTGTCAGTGACTTATTTGGATCAGTTCCTTACCAAACGCAACATTGATGCGGAGAAGGATTGGGCGATAAGGTTGCTATCGATTGCATGTCTTTCTCTGGCTGCAAAGATGGAAGAATGCAATGTGCCTGAGCTATCAAGGTTTCAGTTGGAAGATTGTTATTTCTTTCAAGGAAAAGTGGTTCAAAAAATGGAACTTTTGGTTCTCACCACATTGGATTGGAACATGGGGATCATTACTCCCTTTTCATTCCTTTCTTACTTTATCAAAAGGTTCACCGATGATTCCGCGTCGAATCTTATTGTTTCCAACTCAATGCAACCTATCTTCACTGTAATTATGGAAGGGTTCAATCTAATGGATCACAAACCATCTGTTATTGCAGCAGCTGCTACTTTGGTAGCATTGGATCAAACATTGACCATAGAAGATGTGAGGTTGAAAATGAATTCAATTTTGCAAATTGAACCGAATGATGTATTTGATTGCTACAATCTAATTCAGAGATTATATGAGGAGAAGATTAAAAGAGATGAGCATTTATATACACCGAATTCATCGGTTATCCGATCCAGGACAATTGACTATGCCGTTTCCATGTCAAAGAGAAGAAGACTGTCATTCAATGATGATGAAGATGGTGGTGACAAGAAGGGACCACATCAAGAAGACCCCAAAACTTGA 906 0.3808 MENQVKDEESQQHQFGGVSEDEHVGLLIQKEVSFGFKKDGILMFDESLKRARFNAINWIFKTTEALDFHFQTAYLSVTYLDQFLTKRNIDAEKDWAIRLLSIACLSLAAKMEECNVPELSRFQLEDCYFFQGKVVQKMELLVLTTLDWNMGIITPFSFLSYFIKRFTDDSASNLIVSNSMQPIFTVIMEGFNLMDHKPSVIAAAATLVALDQTLTIEDVRLKMNSILQIEPNDVFDCYNLIQRLYEEKIKRDEHLYTPNSSVIRSRTIDYAVSMSKRRRLSFNDDEDGGDKKGPHQEDPKT 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01793 301 CDD CYCLIN_AtCycD-like_rpt1 51 148 - -
Vivi3g01793 301 FunFam Cyclin-D5-1 47 151 - -
Vivi3g01793 301 Gene3D - 48 151 - -
Vivi3g01793 301 MobiDBLite consensus disorder prediction 279 301 - -
Vivi3g01793 301 SUPERFAMILY Cyclin-like 20 150 IPR036915 -
Vivi3g01793 301 CDD CYCLIN_AtCycD-like_rpt2 153 241 - -
Vivi3g01793 301 SUPERFAMILY Cyclin-like 135 250 IPR036915 -
Vivi3g01793 301 Pfam Cyclin, N-terminal domain 30 150 IPR006671 -
Vivi3g01793 301 Gene3D - 152 239 - -
Vivi3g01793 301 PANTHER CYCLINS 49 249 IPR039361 -
Vivi3g01793 301 SMART cyclin_7 57 144 IPR013763 -
Vivi3g01793 301 Pfam Cyclin, C-terminal domain 153 247 IPR004367 -
Vivi3g01793 301 SMART Cyclin_C_2 153 271 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01793 Vivi-Chr3 29114338 29116533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01793 7 241 Core Cell Cycle Gene Families AT3G50070 34.568 2.17e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01793 K18811 - gmx:100780266 325.479