Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01683 ATGGGTGCTTCTGGAAAATGGGTGAAAGCATTAATCGGACTCAAAAAACACGACAAAGATGAACATGTGAAGGAGGGTGTGAAGAGTAAGAAATGGAGGTTATGGAGAAGTTCATCTGGTGATAACGGTTCCTGGAAAGGTTTTAAAGGTAACAACTCTCATAAAGCAGTTTCTGAAGGTTCTGAATCTCCAACTGCTGCAGAAGCTTACACCGCCGCTGTAGCCACCGTTGTTAGAGCTCAACCTAAGGATTTTAGACTCGTTAGGCAAGAATGGGCTGCTATAAGAATCCAAACCACTTTCCGCGCCTTCTTGGCAAGAAGGGCTTTGAGGGCTTTGAAGGCGGTGGTGAGGATTCAAGCACTAGTTAGGGGTAGGCAAGTGAGGAAGCAAGCTGCGGTGACATTGAGGTGCATGCAGGCGTTGGTTCGAGTTCAGGCTCGAGTGAGGGCTCGTCGAGTGAGGATGTCGATGGAGGGACAAGCTGTGCAGAATATGCTTAATGAGCGGCGGACAAAGCTTGAACTTTTGAAGGATGCTGAGGAAGGGTGGTGTGATAGTATAGGAACATTGGAAGATGTGAAATCGAAGATTCAAATGAGGCAAGAAGGAGCTTTCAAAAGAGAAAGAGCACTTGCATACTCTCTTGCTCAAAAGCAATGCAGATCAACTTCAAGTACTTATTCACAAACCGCTGCCTCGTTTTCATCTCTCAAGAATCCCGAGATGAACAAAGCTAATGGAGGATGGAGTTGGTTGGAAAGATGGATGGCAGCCAAGCCGTGGGAGACAAGATTGATGGAACAATCCCATGCTGAAAGCTTAGATAAAACGCCTCCACCACCTCCGAAGAAATTTGTGGAACCCTTTGTAAGCTCTAATTCAAAACCATGCTCAGTCAATATCAAGAGGAACAATGTTACAACAAGGATTTCCGCTAAGCCTCCTCCCCACATCTGTCAAGCTACTCGTTCGTCCTCTAGTCCAAGTTCCGAGTTTCGGTATGACGAGAGTTCTGCATCATCTTCTATTTGTACATCAGCAACACCAATGTCAGGGAACACTTATGAAAGGACTGAGGATAGTAACAACAACTCTAGGCCAAATTACATGAACCTAACGCAATCAACCAAGGCGAAGCTAAAATCGGGTAATAATCCAATGTATAACCGAGCTCAAAGGCAACAGTCAATGGACGAGTTTCAGTTTATGAGGAGGGCTGCAGGTTTCTCTAATGGAGATTCAAGAAGTATAGCTGCTTCTGACCATTCACTCAACTTTTCTAGGCCACTTCACCTATCAACTCACATGGATAAAAGCTCGGTGAGGCCACGGTGA 1338 0.4544 MGASGKWVKALIGLKKHDKDEHVKEGVKSKKWRLWRSSSGDNGSWKGFKGNNSHKAVSEGSESPTAAEAYTAAVATVVRAQPKDFRLVRQEWAAIRIQTTFRAFLARRALRALKAVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRTKLELLKDAEEGWCDSIGTLEDVKSKIQMRQEGAFKRERALAYSLAQKQCRSTSSTYSQTAASFSSLKNPEMNKANGGWSWLERWMAAKPWETRLMEQSHAESLDKTPPPPPKKFVEPFVSSNSKPCSVNIKRNNVTTRISAKPPPHICQATRSSSSPSSEFRYDESSASSSICTSATPMSGNTYERTEDSNNNSRPNYMNLTQSTKAKLKSGNNPMYNRAQRQQSMDEFQFMRRAAGFSNGDSRSIAASDHSLNFSRPLHLSTHMDKSSVRPR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01683 445 MobiDBLite consensus disorder prediction 319 371 - -
Vivi3g01683 445 PANTHER IQ-DOMAIN 5-RELATED 1 414 - -
Vivi3g01683 445 SMART iq_5 112 133 IPR000048 GO:0005515
Vivi3g01683 445 SMART iq_5 89 111 IPR000048 GO:0005515
Vivi3g01683 445 MobiDBLite consensus disorder prediction 43 62 - -
Vivi3g01683 445 ProSiteProfiles IQ motif profile. 90 118 IPR000048 GO:0005515
Vivi3g01683 445 MobiDBLite consensus disorder prediction 310 371 - -
Vivi3g01683 445 ProSiteProfiles IQ motif profile. 114 141 IPR000048 GO:0005515
Vivi3g01683 445 Gene3D - 88 139 - -
Vivi3g01683 445 MobiDBLite consensus disorder prediction 43 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01683 Vivi-Chr3 27342950 27345215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01683 1 439 IQD Protein Family AT2G26180 59.955 3.48e-149 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01683 - - gmx:100799714 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01683 3 27342950 27345215 Vivi3g01683 3 27342950 27345215 PCT