Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01674 ATGGAGGATCTCGAGGAGGGAGAGAATGGACAAGAAGAGGTGCTTGGTTCAAGCTTGACTATGGAGAAAGTAGCAGCTGCTAAGAAGTTCATTGAGAATCATTATAGGGCACAGATGAAAAATATCCAAGATCGGAAAGAAAGGCGTTGGATTTTGGAAAGAAAATTAGCTTCTTCAGATGTGCCGACTGAAGAACGGCTCAACCTCATCAAAGATTTAGAGAGGAAGGAAACTGAATATATGCGATTGAAAAGGCACAAGATTTGTGTTAATGATTTTGATCTCTTGACCATCATTGGAAGAGGGGCTTTTGGGGAGGTTAGACTGTGTCGGGAGAAGAAATCTGGAAATGTCTATGCCATGAAAAAGCTGAAGAAATCTGAAATGCTTAAGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTATTGGCCGAAGTTGCCAATCATTTCATTGTGAAACTTTACTACTCATTTCAGGATACTGAATACTTGTATTTAATAATGGAGTATCTGCCCGGGGGTGACATTATGACTCTGCTGATGAGGGAAGACACCTTAAGTGAAAATGTGGCTAGATTTTACATGGCACAAAGTGTTCTTGCCATAGAGTCTATTCACAAACATAATTACATTCACAGAGATATTAAACCAGATAATCTACTTCTGGATAAAAATGGTCACATGAAGCTCTCTGATTTTGGACTCTGCAAGCCTATAGATTGCATTACCTTGCCTACACTGCATGAAAATCAAACCATGGATGATGAAACTTTGGCTGAGCCAATGGATATCGATAGCAGTGTTTCTGATGGGAATCGGAAAAACTGGAGAAGCCCGCGTGAGCAGCTCCAACACTGGCAGATGAACAGGAGGAAGTTGGCATTTTCAACCGTGGGGACGCCAGATTACATTGCTCCTGAAGTACTTTTGAAAAAAGGATATGGGATGGAATGTGATTGGTGGTCACTAGGAGCGATAATGTATGAAATGCTGGTTGGGTACCCTCCATTTTACTCTGATGACCCAATAACCACATGCAGAAAGATTGTTCATTGGAGAACCCATTTAAGATTTCCAGAAGATCCTCAATTGACACTTGAGGCTAAGGATCTAATCTACAGATTGATGTGTGATGTTGATCATAGGTTAGGTACTCGAGGTGCACAAGAAATCAAGGCTCATCCATGGTTCAAGGGTGTAGATTGGGATAGACTATATGAAATGGATGCAGCATTTAAACCACAAGTTAATGGGGAATTGGATACCCAAAACTTCATGAAGTTTGATGAGGTAGAACCACCAGATGCAGCAAGAGCTGGGTCCGGATCTTCAAGAAAGATGCTTCTAACTCCCAAAGATCTAAACTTTGTTGGTTATACTTACAAAAACTTCGATGCTGTAAAAGAAGGCCTTCGCCAGTCTTTAAGTGAGTCCATGCAAGATTATGCTTCCAAACGGACAGCTGATGAAACAGGCCTGCAAATGCTCGCGTCGTCTGGAGACCCCATGTTACCATAA 1524 0.4173 MEDLEEGENGQEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIQDRKERRWILERKLASSDVPTEERLNLIKDLERKETEYMRLKRHKICVNDFDLLTIIGRGAFGEVRLCREKKSGNVYAMKKLKKSEMLKRGQVEHVRAERNLLAEVANHFIVKLYYSFQDTEYLYLIMEYLPGGDIMTLLMREDTLSENVARFYMAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPIDCITLPTLHENQTMDDETLAEPMDIDSSVSDGNRKNWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRTHLRFPEDPQLTLEAKDLIYRLMCDVDHRLGTRGAQEIKAHPWFKGVDWDRLYEMDAAFKPQVNGELDTQNFMKFDEVEPPDAARAGSGSSRKMLLTPKDLNFVGYTYKNFDAVKEGLRQSLSESMQDYASKRTADETGLQMLASSGDPMLP 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01674 507 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Vivi3g01674 507 Pfam Protein kinase domain 291 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01674 507 Pfam Protein kinase domain 95 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01674 507 SMART pkinase_C_6 400 465 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vivi3g01674 507 Gene3D Phosphorylase Kinase; domain 1 418 428 - -
Vivi3g01674 507 Gene3D Phosphorylase Kinase; domain 1 91 176 - -
Vivi3g01674 507 FunFam Non-specific serine/threonine protein kinase 418 428 - -
Vivi3g01674 507 SMART serkin_6 93 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01674 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Vivi3g01674 507 CDD MobB_NDR_LATS-like 27 88 - -
Vivi3g01674 507 ProSiteProfiles Protein kinase domain profile. 93 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01674 507 Gene3D Transferase(Phosphotransferase) domain 1 177 240 - -
Vivi3g01674 507 Gene3D Transferase(Phosphotransferase) domain 1 294 417 - -
Vivi3g01674 507 ProSiteProfiles AGC-kinase C-terminal domain profile. 400 473 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vivi3g01674 507 FunFam Non-specific serine/threonine protein kinase 54 176 - -
Vivi3g01674 507 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 445 - -
Vivi3g01674 507 CDD STKc_NDR_like 91 464 - -
Vivi3g01674 507 SUPERFAMILY Protein kinase-like (PK-like) 76 442 IPR011009 -
Vivi3g01674 507 FunFam Non-specific serine/threonine protein kinase 298 417 - -
Vivi3g01674 507 FunFam Non-specific serine/threonine protein kinase 177 244 - -
Vivi3g01674 507 Pfam Protein kinase C terminal domain 418 463 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01674 Vivi-Chr3 27176738 27183956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01674 1 506 AGC Kinase Gene Family AT4G33080 77.996 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Vivi3g01674 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01674 K08790 - gmx:100815717 936.021