Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01673 ATGGAAGAAATGTCGGTTGCTGTGCCGTTAAGAGCAAGTAATTCAGTTTGTGATAATTCAACCATAGCTAACCATATGGATGTTTCAAGACTTAAGTTGATGGCAAATGCAGAGTTGATATCGAATGCTATAACTACGATATCTGCTGACAGTTTTATAGGTTCTGAGGAGGATCGTATTGGTGACAATATGGACAATGAGGTTGGTGTTTCGGCAGTCGCAACACCTTTGCATGGGAGAGAAAGGGAAATTCTTGTGTTGAATATGATATCTCAAGGTAGCGATGAACTTCTAGTTCCAGAAGTTGATGAGGATGATTCGATGTCATTAGAAGGAGATCCGATTATTTACAGCACTCTATCAATAGCCAGTGAGAATAGTAGTGTTTGTGGAGATGAGTTCTTCAGCTCGGAAGATAACTCAGATTTTAGGACAAGGAGTTCGATGGACTCGATGGACATAGATAAGAACATCTCTTCTGTCGAAGTTGTTACTAGGGCTGCTGTTTTTGACAATTCAAATGCGGAGGAAGATATTATTAGTGAACCCCTTGCTGTAGCATCGAGCCTTGGAGACGAAACAGGAGTTAGATCCGTCCCAGTGCCTACTACAGCTGTTCTTCATCAACTACCTCTTGAAAAAGGGGTGAGTGGAACAGTCGGTCGGAGTGTTTTTGAATTGGACTGTACCCCACTTTGGGGATTTACATCAGTGTGTGGAAAAAGACCTGAGATGGAAGATGCCGTTGCGGTTGTACCTCGGATGTTGAAAATTCCTATTCAAATGCTAAATGGTAACAAGAGATATGATGGAATTAACAAGGATTTTAATCAGCAGACAGTTCATTTCTTTGGAGTATATGATGGCCACGGTGGCTTGCAGGTGGCAAATTATTGTCGTGATCGTATGCATTTGGCTTTAGCTGAGGAAGTAGAATTGTTCAAGGAAAGTCTAATAATTGGAAGTCCCAAGGATGATTGTCAAGACTTATGGAAAAAAGCTTTCACTAATTGTTTTTTGAAGGTTGATAATGAAGTTGGGGGGAAAGTTAATTGTGAACCTGTTGCACCAGAAACTGTTGGTTCCACTGCTGTTGTAGCCATTGTTTGTTCATCCCATATTATAGTTTCTAACTGTGGTGATTCCAGAGCGGTTTTGTGCCGTGGAAAAGAACCCATGGCTTTATCTGTGGATCATAAACCAAATCGAGATGATGAATATGCAAGAATCGAGGCAGCTGGTGGCAAGGTGATACAATGGAATGGTCATCGTGTATTTGGAGTTCTTGCAATGTCAAGGTCTATCGGTGATAGATATTTGAAGCCATGGATTATTCCTGAACCAGAAGTTACATTCCTCCCTCGTGCAAAAGACGATGAATGTCTCATTCTGGCCAGTGATGGCTTGTGGGATGTCATGACGAATGAAGAGGCATGCGACTTAGCTCGAAGACGCATACTTCTCTGGCATAAGAAAAATGGCTCAGAGCTGTCCTCAGTAAGGGGAGAGGGAATCGATCCTGCTGCACAGGCGGCTGCAGAATACCTATCAAACCGTGCTTCGCAAAAAGGAAGCAAAGATAACATCACTGTCATCGTGGTAGATTTGAAAGCTCAACGGAAATTTAAGAGTAAAACATGA 1641 0.4205 MEEMSVAVPLRASNSVCDNSTIANHMDVSRLKLMANAELISNAITTISADSFIGSEEDRIGDNMDNEVGVSAVATPLHGREREILVLNMISQGSDELLVPEVDEDDSMSLEGDPIIYSTLSIASENSSVCGDEFFSSEDNSDFRTRSSMDSMDIDKNISSVEVVTRAAVFDNSNAEEDIISEPLAVASSLGDETGVRSVPVPTTAVLHQLPLEKGVSGTVGRSVFELDCTPLWGFTSVCGKRPEMEDAVAVVPRMLKIPIQMLNGNKRYDGINKDFNQQTVHFFGVYDGHGGLQVANYCRDRMHLALAEEVELFKESLIIGSPKDDCQDLWKKAFTNCFLKVDNEVGGKVNCEPVAPETVGSTAVVAIVCSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRAKDDECLILASDGLWDVMTNEEACDLARRRILLWHKKNGSELSSVRGEGIDPAAQAAAEYLSNRASQKGSKDNITVIVVDLKAQRKFKSKT 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01673 546 FunFam Protein phosphatase 2C 16 220 546 - -
Vivi3g01673 546 SUPERFAMILY PP2C-like 228 537 IPR036457 -
Vivi3g01673 546 SMART PP2C_4 222 534 IPR001932 -
Vivi3g01673 546 Gene3D - 219 546 IPR036457 -
Vivi3g01673 546 CDD PP2Cc 234 536 IPR001932 -
Vivi3g01673 546 ProSiteProfiles PPM-type phosphatase domain profile. 232 536 IPR001932 -
Vivi3g01673 546 Pfam Protein phosphatase 2C 259 529 IPR001932 -
Vivi3g01673 546 PANTHER PROTEIN PHOSPHATASE 174 536 IPR015655 GO:0004722|GO:0006470
Vivi3g01673 546 ProSitePatterns PPM-type phosphatase domain signature. 283 291 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01673 Vivi-Chr3 27146393 27149765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01673 201 546 PP2C-type Phosphatase Gene Family AT1G17550 63.866 9.54e-162 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01673 K14497 - gmx:100803321 794.267