Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01661 ATGTATATATATATACATACCATGATGTTTTTTTTTCTTAACTGTATACCAAAAAAAAATATGACAGATAAAAATCCATATTCACCTGATGACAGTGATTTCACCAACCTGTGGCCTTTGGAGCTTTCTGAGTACTTGAAATTCGACGATGATGAATGGCCAGATGATAATCCAGAGCCATTTTTTGCCGAACATGTTACCAACCAAGATAATGAATTAGTAGCTGATTTTGGAGGAAGTGGTAGCCGAATTGAAGGGCCAGCTTCTTCGAGCAGTGAACGTGAGAAGAAGGAAGTTAAAGATAAAGTTGCATTCAGAATAAAGTCAGAGGTTGAAATTCTTGATGATGGATTCAAGTGGAGGAAGTATGGAAAGAAGATGGTTAAAAACAGCCCTAATCCGAGGAACTATTATAAATGTTCTAAAGATGGATGCCATGTGAAGAAGAGAGTTGAGAGAGATGTGGAAGATCCGAGTTATGTGATAACAACCTATGAAGGCACACATACACATCCAAGTTTTCTCTAG 528 0.3731 MYIYIHTMMFFFLNCIPKKNMTDKNPYSPDDSDFTNLWPLELSEYLKFDDDEWPDDNPEPFFAEHVTNQDNELVADFGGSGSRIEGPASSSSEREKKEVKDKVAFRIKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSKDGCHVKKRVERDVEDPSYVITTYEGTHTHPSFL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01661 175 ProSiteProfiles WRKY domain profile. 109 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g01661 175 MobiDBLite consensus disorder prediction 74 97 - -
Vivi3g01661 175 SMART WRKY_cls 114 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g01661 175 Gene3D WRKY domain 101 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g01661 175 SUPERFAMILY WRKY DNA-binding domain 107 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g01661 175 Pfam WRKY DNA -binding domain 115 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g01661 175 FunFam WRKY transcription factor 57 100 174 - -
Vivi3g01661 175 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 72 172 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01661 Vivi-Chr3 27057124 27058168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01661 102 174 WRKY Transcription Factor Family AT5G26170 79.452 1.36e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi3g01661 WRKY 3.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01661 - - psat:127087897 285.034