Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01657 ATGAGTATGAAACGAGAGATAACTTGTGTTCGTGATGGTGAGAGAATGCCTGAATTCCATCTTTCCCTAAGGCCACTCTTAAAAAAACAAACACATGTTCTCACTGCCGGTAGGCGCCTCCGTGGGCGTCCTATAGGATCCAAGAACAAGCCAAAGATACTTGGCGTATTAACAGGTGACAACTGTAACACATTCAAATTTCACACAATTAAGATCAACGATGGAGTTGACATATTGAAACGTTTACTTGATTTTTCTAAGCGTCAAAAGAGGGCCATTAGCATCGTTACTGGAAATGGAGTGGTGGAGAAAGCCAGGTTTCTTCAATCAAATGGAGGAATTACAACTCTTCATGGAACGTTTAATATTCTCTCTATATCTGGGATAATTATACTAGCGCCCAAACTAGAGAGTGAAGCCAAATTAGCAATTTCTTTATCGATCTTGGAAGAAAATGTTTTTGGGGGGAATGTGATTTCCCCTCTGATAGCTTCGGGTTCAGTGGTATTAAAAGTTATTTCATTTGAAAACACCATAGTTGAAAAGCTTTCTTCAGCGGCCAATGATCATATCAAACCTGAACCATGA 588 0.3963 MSMKREITCVRDGERMPEFHLSLRPLLKKQTHVLTAGRRLRGRPIGSKNKPKILGVLTGDNCNTFKFHTIKINDGVDILKRLLDFSKRQKRAISIVTGNGVVEKARFLQSNGGITTLHGTFNILSISGIIILAPKLESEAKLAISLSILEENVFGGNVISPLIASGSVVLKVISFENTIVEKLSSAANDHIKPEP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01657 195 Pfam Plants and Prokaryotes Conserved (PCC) domain 67 177 IPR005175 -
Vivi3g01657 195 SUPERFAMILY AF0104/ALDC/Ptd012-like 62 184 - -
Vivi3g01657 195 Gene3D - 66 190 - -
Vivi3g01657 195 ProSiteProfiles PPC domain profile profile. 62 195 IPR005175 -
Vivi3g01657 195 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 186 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01657 Vivi-Chr3 27002766 27003353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01657 35 183 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 38.125 7.40e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01657 - - vvo:131657761 379.407