Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01649 ATGAGCACGAGAAACAGTCCTCAAACTCAGAAGAGTCTGTCTAGGCAGTCATCGAAGTCGAATTCGAGGAGGAAGCAAGAGCCGCTTAGCCCGTTTTCGGGCGGTGGTTGTTGTCGAGGGTTCACCAGTGTGAAGACGGTTGCGTCCACCACATCAACGGTGCAACAACATCAGCTCCAACAGCGTTATGAGAGTTTGGAAGTCAAGGTAGCAGATATGGAAAAGGAGGTGCAAAAGCAAGCAGAACTGAGAGTAATGTATAGAAAAAGAATGGAAAGGACACAAGATTATTTAAGGTACTGCCTCCAAATAGCACAAGAGAATGGAATCTTAGAACAAATTATTCACACCAAAGGTGAACTCCAACAATCACCTTACAATGTCTCCTCCATTATCAATAGTCCTCAAATTCCCACTCCTATCCACCAGCACCACCCCAATCTAGAGGCCATCATTGATCAAGCCAAAATCAATGGGTGGTACATTAACCCAACAGAGATTCAGCTAAAAGATAAAATAGGTCAAGGAACCACAGCAGACATCTACCGAGCAACATGGCGAGGATTCGATGTAGCAGTGAAATGCATTTCACCTGAATTCTTTCGAACAAATGCAAACGGTGTCGAATTCTTTGCTCAAGAAGTTGAAACTCTCTCAAAACAACGGCACAGGTTTGTGCTTAATCTAATGGGTGCATGTCTTAACCCTCCTAATCATGCATGGGTTGTTACAGAATTTCTAAACACCACACTCAAGGAATGGCTTTATGGTCCTGGAAAAAGGCGTAGAGATAGAATTGTGCCACTTCCTACTCTGAAAGAAAGAGTGCTACGGGCTTTAGAAATAGCCCAAGCTATGCAATATCTTCATGAACAAAAGCCCAAGATTGTTCACCGTGATTTGAAGCCCAGCAACATTTTCTTGGACTTTAATTTGCATGTTAGAGTTGCTGATTTTGGACATGCTCGTTTTTTAGGAGATGGTGAAATGGCTCTTACTGGAGAAACAGGAACATATGTGTATATGTCACCAGAAGTGATACGATGTGAGCCATATAATGAAAAATGTGATGTATACAGTTTTGGAGTGATACTGAATGAGCTTTTAACAGGAAAACATCCTTATATTGAGACAGAATATGGTCCTGCCAAGATTGCTATGGAAGTTGTAGAGGGCAAGTTGCGACCTATGCTTCCTTCAAGGGATGATGGTGAGCAGTTGGGAGAATTGATTGATGTTATACGTCTTTGTTGGGATGGAAATCCTTCCACTAGACCATCTTTTGATATAATTAGTCGTATTCTTAAAAGCTATTACAATAGGGTTCTTCAATTTTCAAAATAG 1344 0.4152 MSTRNSPQTQKSLSRQSSKSNSRRKQEPLSPFSGGGCCRGFTSVKTVASTTSTVQQHQLQQRYESLEVKVADMEKEVQKQAELRVMYRKRMERTQDYLRYCLQIAQENGILEQIIHTKGELQQSPYNVSSIINSPQIPTPIHQHHPNLEAIIDQAKINGWYINPTEIQLKDKIGQGTTADIYRATWRGFDVAVKCISPEFFRTNANGVEFFAQEVETLSKQRHRFVLNLMGACLNPPNHAWVVTEFLNTTLKEWLYGPGKRRRDRIVPLPTLKERVLRALEIAQAMQYLHEQKPKIVHRDLKPSNIFLDFNLHVRVADFGHARFLGDGEMALTGETGTYVYMSPEVIRCEPYNEKCDVYSFGVILNELLTGKHPYIETEYGPAKIAMEVVEGKLRPMLPSRDDGEQLGELIDVIRLCWDGNPSTRPSFDIISRILKSYYNRVLQFSK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01649 447 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 435 - -
Vivi3g01649 447 MobiDBLite consensus disorder prediction 1 28 - -
Vivi3g01649 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Vivi3g01649 447 Gene3D Transferase(Phosphotransferase) domain 1 269 446 - -
Vivi3g01649 447 Gene3D Phosphorylase Kinase; domain 1 149 248 - -
Vivi3g01649 447 SUPERFAMILY Protein kinase-like (PK-like) 144 431 IPR011009 -
Vivi3g01649 447 Pfam Protein kinase domain 169 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01649 447 CDD STKc_MAP3K-like 173 435 - -
Vivi3g01649 447 MobiDBLite consensus disorder prediction 1 34 - -
Vivi3g01649 447 ProSitePatterns Protein kinases ATP-binding region signature. 173 194 IPR017441 GO:0005524
Vivi3g01649 447 Coils Coil 56 83 - -
Vivi3g01649 447 ProSiteProfiles Protein kinase domain profile. 167 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01649 447 SMART serkin_6 167 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01649 Vivi-Chr3 26873446 26877048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01649 160 442 MAP Kinase Kinase Kinase AT4G35780 34.507 1.02e-46 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Vivi3g01649 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01649 - - gmx:100810435 677.167