Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01628 ATGTATTCGCCGTTGCTGATGCATCGTACAGGTCATAGCCAATCTATATTGGTCAGTGGTGAAAGTGGTGCTGGAAAAACTGAAACAACGAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGCCGTGCTGTTTGTGATGATAGATCAGTTGAACAACAAGTTCTTGAGTCGAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACTGTTAGGAATGACAATTCAAGCCGTTTTGGGAAGTTCGTTGAAATTCAGTTTGATTCAAAGGGTAAAATATCTGGTGCTGCAATTAGAACTTACTTATTGGAAAGATCTAGAGTAGTGCAGACTACAGATCCCGAAAGAAATTATCACTGCTTTTATCAGTTGTGTGCATCTGAAAGGGATGCAGAGAAGTATAAGTTAGGACATCCAAGCCACTTCCACTATTTGAATCAAAGTAAAGTTTACGAATTAGATGGTGTTAGCAGTGCCGAAGAGTACATAAAGACAAGAAAATCAATGGATATTGTTGGCATTAGTCATGAGGATCAGGAAGCCATTTTTCGCACCTTAGCTGCAATTTTACATCTAGGTAATGTTGAATTTTCTCCTGGGAAAGAGCACGACTCGTCAATAGTGAAGGATGAGAAATCAAAATTTCATTTGCAGATGGCTGCTAATCTTTTCAAGTGTGATCTGAACCTACTGCAAGCAACATTATGTACTCGTTCAATACAAACCCGCGAAGGAAATATTGTCAAAGCTCTTGATTGTAATGCCGCTGTTGCTGGCAGGGATGTTTTGGCGAAAACCGTCTATGCCCGTTTGTTTGATTGGCTTGTTGATAAGATTAATAAAGCGGTTGGGCAAGATATCAATTCCAGGATGCAAATTGGAATATTGGATATATATGGGTTTGAGTCTTTTAAGGATAACAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAACAACACTTTAATGAGCATGTATTCAAGATGGAGCAAGCGGAGTATAGTAAAGAAGAAATTAAATGGAGTTACATTGAATTTATAGACAACCAAGATGTTTTAGATTTAATTGAAAAGAAGCCCATTGGTATCATTGCCCTGTTAGATGAAGCTTGCATGTTTCCAAAATCGACGCATGAAACATTCTCAACCAAGTTGTTTAAGCACTTCTTGTGCCACACTAGGTTTGGAAAGGAGAAGTTTTCAGAAACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTCACATACCATACAGACACATTTCTAGACAAAAATCGTGATTATGTAGTTCTAGAGCATTGTAATGTATTATCGTCTTCAAAATGCTCTTTTGTGTCTGGTCTTTTTCCTTCTTTACCGGAGGAATCTTCAAGGTCATCCTACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAAGCACTTATGGAAACACTCAAGACAACAGAGCCTCATTACATTCGATGCGTCAAGCCAAATTCCTTGAATTTACCACAAAAGTTTGAGAACACAAGTGTCTTACACCAATTACGTTGCGGGGGTGTACTTGAGGCGGTTCGGATAAGTCTGGCAGGTTACCCAACTCGAAGGACTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAACTCCTGAGTTTTCAGATGGAAGTTATGATGATAGAGCTACAACCCAGAAAATATTGCAAAAGCTAAAACTTGAGAATTTCCAGCTGGGTAGGACTAAAGTGTTTCTCAGGGCTGGTCAAATCGGTATTTTAGACTCTAGGCGAGCTGAAGTTTTGGACAATGCTGCAAAATGTATTCAGCGTCGGCTGCATACATTTATTGCTCACAGAGATTTCATCTCAACTCGAGTTGCTGCAGTTTCTCTTCAAGCATGCTGCAGGGGATGCCTTGCAAGGAGGATATATGCTTTTAAGCGGGAGAATGCAGCAGCTATCTCCATTCAGAAATATATTCGTATGGGTCTGACGAGGCGTGTTTACATGACACTGTACTCTTCTGCTATCATCATACAATCAAATGTTCGCGGTTTCACAACTCGCCAAAGATTTTTGCATAGAAAAGAACACAAAGCTGCTACTATTATTCAGGCGTATTGGAGGATGTGCAAGGTTCGGTCTGCTTTCAAACAACATCAATTTTCAATTGTGGCAATACAATGCCTTTGGCGCTGTAAACAAGCAAAAAAACAGCTTCGTAGACTTAAACAAGAGGCTAGTGAAGCCGGTGCCTTGCGTTTAGCCAAGACTAAACTTGAGAAACAATTGGAAGAGCTCACATGGCGTTTGCATCTTGAAAAAAAATTAAGGGTGTCTAATGAAGAGGCTAAGCAAGTTGAGATTTCCAAGTTTCAGAAGGCATTGGAAGCTCTCAATTGTGAATTAGATGGAGCTAAATTGGCAACTATCAATGAGTCGAATAAGAATGCAATTTTGCAAAATCAATTGCAACTATCAGAAAAGGAAAAATCTGCTTTAGAAAGAGAGCTAGTTGTAATGAACGAAGTGCGAAAGGAAAATGCTCTGATGAAGGCTTCTATGGATGCCTTGGAAAAGAAGAGCACAGCTTTGGAGCACGAGCTTGTGAATGCTCAAAAAGACCATAATGAAACAATTCAGAAAATGAGGGAGTTTGAACAGAAGAGTTCTCAACTTGCACAAAATATGAAAAGTCTTGAAGAAAAGCTATTGAGTTTGGAGAATGAAAATCAAGTGCTTCGCCAGAAAGCCTTAACTGTATCTCCTAAGAGTAATCGTCCTAGTTTTACAAAGTCATCATCAGAAAAATTCTCAAGGACAATAGCCCTCAACACTGAGCAAAACCCAGTATATGAATCACCTACACCCACGAAACTTATGCCCTCTTTTACACGTGGCTTGTCAGATTCTCGTCGATCTAAATTAACAGCAGAAAGGCACCAGGATAACTATGCATTCCTCACTAGGTGTATTAAAGAGGATCTGGGTTTCAAAAAAAGTAAACCTGTGGCAGCTAGTATCATATACAAATGTCTTCTTCATTGGCATGCATTTGAGTCTGAGCGCACAGCCATATTTGATTTCATAATTGATGGAATTAATGAAGTCATAAAAGTTAGAGATGATGACACTGTCTTGCCATATTGGTTGTCCAATACCTCCGCACTTGTGTGCCTTTTACAGAGAAATGTCCGTTCAAATGGTTTCTTAAATACCACTGGTCAACGTTATGCTGGATCATCTGGATTGACCAGCCGGATGGGGCATGCAATGAAGTCTCCATTGAAGTTAATTGGATATAATGATGGTATATCACATGTGGAGGCAAGATATCCAGCTATGCTATTTAAGCAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGCCTAATACGTGATAATTTGAAAAAGGAACTTTCTCCACTTCTGGCATTATGTATTCAGGCACCCAAGACAGGGCGGGCACAAAGTGGAAAATCATCTAGATCTCCTGGGGGGCTTCCTCAACAATCACCTGGCGGCCAATGGGACAACATCATCAATTTTTTGAATTCACTCTTGAACCAATTATGTGCGAATAATATACCATCCTTCTTCATCCGCAAGCTAGTTACACAGGTCTTTTCCTTCATCAATATGACATTGTTCAACAGTCTTCTTTTGCGGCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTAAAGTCTGGTCTTGCAGAACTGGAGAAATGGATAGTTAATGCAAATGAAGAGTATGCAGGAACATCCTGGCATGAGCTGAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATACATCAGAAGAGGAAGAAATCATTGGAAGAAATTAGGCAGGATCTTTGTCCGGCATTAACTGTGAGGCAAATCTATCGAATTAGTACTATGTATTGGGATGACAAGTATGGAACCCAGAGTGTATCCAACGAGGTAGTTGGTGAAATGAGGGAAATTGTGAGCAAAGACAATCAGAGTTTGGCCTCAAATTCGTTCTTGATGGATGACGACATGAGTATTCCTTTTTCTGCTGAAGACATAGATATGGCTATCCCTGCTGTGAATACTGATGATATTGAGCTTCCAGCATTCTTGTGTGAATATCCTTGTGCCCAGTTTCTAGTTTCGCATGAGTAA 4149 0.3953 MYSPLLMHRTGHSQSILVSGESGAGKTETTKLIMQYLTFVGGRAVCDDRSVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSKGKISGAAIRTYLLERSRVVQTTDPERNYHCFYQLCASERDAEKYKLGHPSHFHYLNQSKVYELDGVSSAEEYIKTRKSMDIVGISHEDQEAIFRTLAAILHLGNVEFSPGKEHDSSIVKDEKSKFHLQMAANLFKCDLNLLQATLCTRSIQTREGNIVKALDCNAAVAGRDVLAKTVYARLFDWLVDKINKAVGQDINSRMQIGILDIYGFESFKDNSFEQFCINFANEKLQQHFNEHVFKMEQAEYSKEEIKWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFKHFLCHTRFGKEKFSETDFTVSHYAGKVTYHTDTFLDKNRDYVVLEHCNVLSSSKCSFVSGLFPSLPEESSRSSYKFSSVASRFKQQLQALMETLKTTEPHYIRCVKPNSLNLPQKFENTSVLHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLITPEFSDGSYDDRATTQKILQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLHTFIAHRDFISTRVAAVSLQACCRGCLARRIYAFKRENAAAISIQKYIRMGLTRRVYMTLYSSAIIIQSNVRGFTTRQRFLHRKEHKAATIIQAYWRMCKVRSAFKQHQFSIVAIQCLWRCKQAKKQLRRLKQEASEAGALRLAKTKLEKQLEELTWRLHLEKKLRVSNEEAKQVEISKFQKALEALNCELDGAKLATINESNKNAILQNQLQLSEKEKSALERELVVMNEVRKENALMKASMDALEKKSTALEHELVNAQKDHNETIQKMREFEQKSSQLAQNMKSLEEKLLSLENENQVLRQKALTVSPKSNRPSFTKSSSEKFSRTIALNTEQNPVYESPTPTKLMPSFTRGLSDSRRSKLTAERHQDNYAFLTRCIKEDLGFKKSKPVAASIIYKCLLHWHAFESERTAIFDFIIDGINEVIKVRDDDTVLPYWLSNTSALVCLLQRNVRSNGFLNTTGQRYAGSSGLTSRMGHAMKSPLKLIGYNDGISHVEARYPAMLFKQQLTACVEKIFGLIRDNLKKELSPLLALCIQAPKTGRAQSGKSSRSPGGLPQQSPGGQWDNIINFLNSLLNQLCANNIPSFFIRKLVTQVFSFINMTLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNANEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVGEMREIVSKDNQSLASNSFLMDDDMSIPFSAEDIDMAIPAVNTDDIELPAFLCEYPCAQFLVSHE 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01628 1382 SMART DIL_2 1201 1308 IPR002710 -
Vivi3g01628 1382 PRINTS Myosin heavy chain signature 345 373 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01628 1382 PRINTS Myosin heavy chain signature 13 38 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01628 1382 PRINTS Myosin heavy chain signature 292 320 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01628 1382 PRINTS Myosin heavy chain signature 60 87 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01628 1382 ProSiteProfiles Myosin motor domain profile. 1 596 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01628 1382 ProSiteProfiles IQ motif profile. 647 673 IPR000048 GO:0005515
Vivi3g01628 1382 PANTHER MYOSIN 7 1315 - -
Vivi3g01628 1382 MobiDBLite consensus disorder prediction 917 936 - -
Vivi3g01628 1382 FunFam Myosin heavy chain 116 170 - -
Vivi3g01628 1382 ProSiteProfiles Dilute domain profile. 1026 1326 IPR002710 -
Vivi3g01628 1382 Coils Coil 731 751 - -
Vivi3g01628 1382 CDD MyosinXI_CBD 977 1349 IPR037975 GO:0007015
Vivi3g01628 1382 Coils Coil 787 807 - -
Vivi3g01628 1382 SMART iq_5 669 691 IPR000048 GO:0005515
Vivi3g01628 1382 SMART iq_5 717 739 IPR000048 GO:0005515
Vivi3g01628 1382 SMART iq_5 621 643 IPR000048 GO:0005515
Vivi3g01628 1382 SMART iq_5 694 716 IPR000048 GO:0005515
Vivi3g01628 1382 SMART iq_5 646 668 IPR000048 GO:0005515
Vivi3g01628 1382 ProSiteProfiles IQ motif profile. 622 651 IPR000048 GO:0005515
Vivi3g01628 1382 Pfam Myosin head (motor domain) 7 584 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01628 1382 Gene3D - 530 597 - -
Vivi3g01628 1382 Pfam DIL domain 1202 1305 IPR002710 -
Vivi3g01628 1382 Coils Coil 815 915 - -
Vivi3g01628 1382 Gene3D Myosin VI head, motor domain, U50 subdomain 175 465 - -
Vivi3g01628 1382 ProSiteProfiles IQ motif profile. 695 724 IPR000048 GO:0005515
Vivi3g01628 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 689 750 IPR027417 -
Vivi3g01628 1382 Pfam IQ calmodulin-binding motif 624 642 IPR000048 GO:0005515
Vivi3g01628 1382 Pfam IQ calmodulin-binding motif 672 690 IPR000048 GO:0005515
Vivi3g01628 1382 Pfam IQ calmodulin-binding motif 649 667 IPR000048 GO:0005515
Vivi3g01628 1382 Pfam IQ calmodulin-binding motif 696 716 IPR000048 GO:0005515
Vivi3g01628 1382 SMART MYSc_2a 1 597 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01628 1382 ProSiteProfiles IQ motif profile. 670 699 IPR000048 GO:0005515
Vivi3g01628 1382 Gene3D - 697 746 - -
Vivi3g01628 1382 Gene3D - 649 696 - -
Vivi3g01628 1382 Gene3D - 598 648 - -
Vivi3g01628 1382 Gene3D - 116 173 - -
Vivi3g01628 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 645 IPR027417 -
Vivi3g01628 1382 MobiDBLite consensus disorder prediction 1153 1172 - -
Vivi3g01628 1382 Gene3D Kinesin motor domain 7 526 IPR036961 -
Vivi3g01628 1382 Gene3D - 302 487 - -
Vivi3g01628 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 644 694 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01628 Vivi-Chr3 26503452 26531970 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01628 13 1379 Myosins gene family AT4G33200 72.129 0.0 2015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01628 K10357 - gmx:100796413 2316.58