Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01619 ATGAGTGGCGGCGAGGATGAAGAAAAAAGGTTGAAATTGAAGCGAAATTCTTCTCGGTTCAGCAATTTTCAACGCGATCTTATGGCTGGTGCGTTGATGGGTGGTGCGGTTCATACGCTTGTTGCGCCGATTGAGAGGGCTAAATTGTTGTTGCAGACACAAGAGAGTAACTTGGCTATTGTTGCTAGTGGAAGGAGAAAATTCAAGGGGATGTTTGATTGTATAATTCGGACCGTTAAGGAGGAAGGTATTGTCTCTTTGTGGCGTGGTAATGGGAGTAGTGTTCTTCGCTATTATCCTTCTGTTGCACTCAATTTCTCGCTAAAGGATCTTTACAAAAGCATATTAAGGGGTGGGAACTCTAATGCCGATAATTTTTTCTCTGGTGCATCCGCTAATTTTGTTGCCGGATCTGCAGCAGGTTGTACATCACTTATCTTGGTATACCCCCTTGATATCGCACACACACGCCTTGCCGCTGACATTGGGAGGACGGAAGCGCGCCAATTCCGAGGCATTTACCATTTCTTAGCCACAATATTCCAAAAAGACGGGGTTCGGGGGATTTACAGGGGCCTTCCTGCATCACTACATGGTATGGTGGTTCATAGAGGTCTTTACTTCGGAGGGTTCGATACCATAAAAGAGAAGTTGTCTGAAGAATCTAAACCCGAGTTGGTGCTGTGGAAACGTTGGATGGTAGCTCAAGCAGTTACAACCTCAGCCGGTCTAATATCATACCCGCTAGACACAGTTCGTAGGAGGATGATGATGCAGTCTGGCATGGAACACCCGGTGTACACTAGCACCCTCGACTGCTGGAGGAAAATCTATCGAACTGAGGGATTGGTTTCATTCTACCGTGGCACGGTTTCGAATGTGTTTAGGAGCACTGGAGCTGCAGCTATCTTAGTCTTGTATGATGAGGTCAAGAAATTTATGAATTGGGGAGGATTGTGA 960 0.4615 MSGGEDEEKRLKLKRNSSRFSNFQRDLMAGALMGGAVHTLVAPIERAKLLLQTQESNLAIVASGRRKFKGMFDCIIRTVKEEGIVSLWRGNGSSVLRYYPSVALNFSLKDLYKSILRGGNSNADNFFSGASANFVAGSAAGCTSLILVYPLDIAHTRLAADIGRTEARQFRGIYHFLATIFQKDGVRGIYRGLPASLHGMVVHRGLYFGGFDTIKEKLSEESKPELVLWKRWMVAQAVTTSAGLISYPLDTVRRRMMMQSGMEHPVYTSTLDCWRKIYRTEGLVSFYRGTVSNVFRSTGAAAILVLYDEVKKFMNWGGL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01619 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 217 IPR018108 -
Vivi3g01619 319 Pfam Mitochondrial carrier protein 131 220 IPR018108 -
Vivi3g01619 319 Pfam Mitochondrial carrier protein 228 315 IPR018108 -
Vivi3g01619 319 Pfam Mitochondrial carrier protein 22 117 IPR018108 -
Vivi3g01619 319 Gene3D Mitochondrial carrier domain 19 314 IPR023395 -
Vivi3g01619 319 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 21 316 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g01619 319 SUPERFAMILY Mitochondrial carrier 21 309 IPR023395 -
Vivi3g01619 319 FunFam probable ADP,ATP carrier protein At5g56450 25 316 - -
Vivi3g01619 319 PRINTS Adenine nucleotide translocator signature 23 35 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g01619 319 PRINTS Adenine nucleotide translocator signature 101 113 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g01619 319 PRINTS Adenine nucleotide translocator signature 128 141 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g01619 319 PRINTS Adenine nucleotide translocator signature 68 89 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g01619 319 PRINTS Adenine nucleotide translocator signature 231 247 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vivi3g01619 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 21 115 IPR018108 -
Vivi3g01619 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 313 IPR018108 -
Vivi3g01619 319 PRINTS Mitochondrial carrier protein signature 190 208 IPR002067 GO:0055085
Vivi3g01619 319 PRINTS Mitochondrial carrier protein signature 235 257 IPR002067 GO:0055085
Vivi3g01619 319 PRINTS Mitochondrial carrier protein signature 143 161 IPR002067 GO:0055085
Vivi3g01619 319 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Vivi3g01619 319 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Vivi3g01619 319 PRINTS Mitochondrial carrier protein signature 26 39 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01619 Vivi-Chr3 26413621 26418186 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01619 20 311 Antiporters AT5G13490 39.597 5.77e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01619 K05863 - gmx:100807764 534.258