Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01599 ATGACAGATAAAAATCCATATTCACCTGATGACAGTGATTTCACTAACCAGTGGCCTTTGGAGCTCTCTGAGTACTTGAAATTCGACGATGATGAATGGCCAGATGATAATCCAGAGCCATTTTTCGCCGAACATGTTTCCAACCAAGATAATGAATTAGTAGCTGATTTTGGAGGAAGTTGGAACCGAGTTGAAGAGCCAGCAGCTTCCAGCAGTGAACGTGAGAAGAAGGAAGTTAAAGATAAAGTTGCATTCAGAATAAAATCAGAGGTTGAAATTCTTGATGATGGATTCAAGTGGAGGAAGTATGGAAAGAAGATGGTTAAAAACAGCCCTAATCCGAGGAACTATTATAAATGTTCTAAAGATGGATGCCATGTGAAGAAGAGAGTTGAGAGAGATGTGGAAGATCCGAGTTATGTGATAACAACCTATGAAGGCACACATACACATCCAAGTTTTCACTAG 468 0.3974 MTDKNPYSPDDSDFTNQWPLELSEYLKFDDDEWPDDNPEPFFAEHVSNQDNELVADFGGSWNRVEEPAASSSEREKKEVKDKVAFRIKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSKDGCHVKKRVERDVEDPSYVITTYEGTHTHPSFH 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01599 155 Pfam WRKY DNA -binding domain 95 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g01599 155 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 52 152 IPR044810 GO:0003700
Vivi3g01599 155 Gene3D WRKY domain 81 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g01599 155 FunFam WRKY transcription factor 57 80 154 - -
Vivi3g01599 155 SUPERFAMILY WRKY DNA-binding domain 87 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g01599 155 ProSiteProfiles WRKY domain profile. 89 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g01599 155 SMART WRKY_cls 94 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01599 Vivi-Chr3 26164382 26165149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01599 82 155 WRKY Transcription Factor Family AT5G26170 78.378 5.92e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi3g01599 WRKY 2.5e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01599 3 26164382 26165149 Vivi3g01599 3 26164382 26165149 ECH