Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01572 ATGCAGCCTTACTATGAAAATGAAATTCCCAATAATACCCTTTACCATCATCAACAACAACAACTCACCATTGATAATTCTCACTCCTCCATTCTCTCCACACCTCAACTTACCTTAACACCAAACCACATTCATCACCCTATTCTCCAACACTATCATCATTCACACTCTCCACATCACCGACAACAATTTCAACATTTTTATCAACATAAATATCAACCACAACCACCACAACAACAAGAACAACAAGAAACATATTCTTTGGGTGAGACTATTGTAAACCGTTACATCGAATGCGAGGAAGGATCCACAGCTAGAGTATCTTTTTGGAAAGCATTCAACAACACAGTGCAATATGATGCAACAGAAAAACAACATAATGAAAACCAAAACGAGACATGTTTGGTTTTGGACAACAACTTCGACGAGCTTGAAGCAGTGTACAAAAACAAACTTGGCCGGAATGGAGAAGAACGGGAAAGTACAAGGAAGAAGATGAGGAAGAGGAAAGTAGTGAAGGAAGAATTGAGTATGATGAATTCGTTTCTCAAGAGGCTGGTGAAGCGTGTGGTGAATCATCAAGAGGCTCTTCAGAATAGATTGTTGGAGGTGATTGATAGAATGGAGAGAAAACGAATAGAGAGGGAAGAAAATTGGAGGCGAGAAGAGAATGAGTTGTATGAAAGAGAAGCTATTGTGAAAGCACGTGAGAGAGATCTTGCTAAACGAAGAGAGTCTTCCATTGTTTCAAGCATAGAGAAAATTACTGGTCGAAAATTCTTTTTTGTTTCTGAGAGCACTCATCAAAATTGA 813 0.3875 MQPYYENEIPNNTLYHHQQQQLTIDNSHSSILSTPQLTLTPNHIHHPILQHYHHSHSPHHRQQFQHFYQHKYQPQPPQQQEQQETYSLGETIVNRYIECEEGSTARVSFWKAFNNTVQYDATEKQHNENQNETCLVLDNNFDELEAVYKNKLGRNGEERESTRKKMRKRKVVKEELSMMNSFLKRLVKRVVNHQEALQNRLLEVIDRMERKRIEREENWRREENELYEREAIVKARERDLAKRRESSIVSSIEKITGRKFFFVSESTHQN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01572 270 Coils Coil 194 225 - -
Vivi3g01572 270 PANTHER FI21293P1 113 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01572 Vivi-Chr3 25742253 25743753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01572 182 256 Trihelix Transcription Factor Family AT1G76880 34.667 5.64e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01572 - - tpra:123894204 229.95