Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01565 ATGAATGAAGGTCATAGCCAATCTATATTGGTCAGTGGTGAAAGTGGTGCTGGGAAAACTGAAACAACGAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGCCGTGCTGTTTGTGATGATAGATCAGTTGAACAACAAGTTCTTGAGTCGAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACTGTTAGGAATGACAATTCAAGCCGTTTTGGGAAGTTCGTTGAAATTCAGTTTGATTCAAAGGGTAAAATATCCGGTGCTGCAATTAGAACTTACTTATTGGAAAGATCTAGAGTAGTGCAGACTACAGATCCCGAAAGAAATTATCACTGCTTTTATCAGTTGTGTGCATCTGAAAAGGATGCAGAGAAGTATAAGTTAGGACATCCAAGCCACTTCCACTATTTGAATCAAAGTAGAGTTTACGAATTAGATGGTGTTAGCAGTGCCGAAGAGTACATAAAGACGAGAAAATCAATGGATATTGTTGGCATTAGTCATGAGGATCAGGAAGCCATTTTTCGCACCTTAGCTGCTATTTTACATCTAGGAAATGTTGAATTTTCTCCTGGGAAAGAGCACGACTCGTCAATAGTGAAGGATGAGAAATCAAAATTTCATTTGCAGATGGCTGCTAATCTTTTCAAGTGTGATCTGAACCTACTGCAAGCAACATTATGTACTCGTTCAATACAAACCCGTGAAGGAAATATTGTCAAAGCTCTTGATTGTAATGCCGCTGTTGCTGGCAGGGATGTTTTAGCGAAAACCGTCTATGCCCGTTTATTTGATTGGCTTGTTGATAAGATTAATAAAGCGGTTGGGCAAGATATCAATTCCAGGATGCAAATTGGAATATTGGATATATATGGGTTTGAGTCTTTTAAGGATAACAGTTTTGAGCAGTTCTGCATCAATTTTGCAAATGAAAAGCTTCAACAACACTTTAATGAGCATGTATTCAAGATGGAGCAAGCGGAGTATAGTAAAGAAGAAATTAAATGGAGTTACATTGAATTTATAGACAATCAAGATGTTTTAGATTTAATTGAAAAGAAGCCCATTGGTATCATTGCCCTGTTAGATGAAGCTTGCATGTTTCCAAAATCGACGCATGAAACATTCTCAACCAAGTTGTTTAAGCACTTCTTGAGCCACACTAGGTTTGGAAAGGAGAAGTTTTCAGAAACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTCACATACCATACGGACACATTTCTAGACAAAAATCGTGATTATGTAGTTCTAGAGCATTGTAATGTATTATCGTCTTCAAAATGCTCTTTTGTGTCTGGTCTTTTTCCTTCTTTACCGGAGGAATCTTCAAGGTCATCCTACAAGTTTTCTTCAGTGGCTTCCAGATTTAAGCAACAACTTCAAGCACTTATGGAAACGCTCAAGACAACAGAGCCTCATTACATTCGATGCGTCAAGCCAAATTCCTTGAATTTACCACAAAAGTTTGAGAACACAAGTGTCTTACACCAATTACGTTGCGGGGGTGTACTTGAGGCGGTTCGGATAAGTCTGGCAGGTTACCCAACTCGAAGGACTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAACTCCTGAGTTTTCAGATGGAAGTTATGATGATAGAGCTACAACTCAGAAAATATTGCAAAAGCTAAAACTTGAGAATTTCCAGCTGGGTAGGACTAAAGTGTTTCTCAGGGCTGGTCAAATCGGTATTTTAGACTCTAGGCGAGCTGAAGTTTTGGATAATGCTGCAAAATGTATTCAGCGTCGACTGCATACATTTATTGCTCACAGAGATTTCATCTCAACTCGAGTTGCTGCAGTTTCTCTTCAATCATGCTGCAGGGGATGCCTTGCAAGGAGGATATATGCTTTTAAGCGGGAGACTGCAGCAGCGATATTCATTCAGAAGTATATTCGTATGGGTTTGACGAGGCGTGTTTACGTGACACTGTACTCTTCTGCTATCATCATACAATCAAATGTCCGCGGTTTCACAACTCGCCAAAGATATTTGCATAGAAAAGAACACAAAGCTGCTACTATTATTCAGGCGTATTGGAGGATGTGCAAGGTTCGGTCTGCTTTCAAACAACATCAATTTTCAATTGTGGCAATACAATGCCTTTGGCGCTGTAAACAAGCAAAAAAACAGCTTCGTAGACTTAAACAAGAGGCTAGTGAAGCTGGTGCCTTGCGTTTAGCCAAGACTAAACTTGAGAAACAATTGGAAGAGCTCACATGGCGTTTGCATCTTGAAAAAAAATTAAGGGTGTCTAATGAAGAGTCTAAGCAAGTTGAGATTTCCAAGTTTCAGAAGGCATTGGAAGCTCTGAATTATGAATTAGATGGAGCTAAATTGGCAACTATCAATGAATCGAATAAGAATGCAATTTTGCAAAATCAATTGCAACTATCAGAAAAGGAAAAATCTGCTTTAGAAAGAGAGCTAGTTGTAATGAACGAAGTGCGAAAGGAAAATGCTCTGATGAAGGCTTCTATGGATGCCTTGGAAAAGAAGAGCACAGCATTGGAGCATGAGCTTGTGAATGCCCAAAAAGACCATAATGAAACCATTCAGAAAATGAGGGAGTTTGAACAGAAGAGTTCTCAACTTGCACAAAATATGAAAAGTCTTGAAGAAAAGCTATTGAGTTTGGAGAATGAAAATCAAGTGCTTCGCCAGAAAGCCTTAACTGTATCTCCTAAGAGTAATCGTCCTAGTTTTACGAAGTCATCATCAGAAAAATTCTCGAGGACAATAGCCCTCAACACTGAGCAAAGCCCAGTATATGAATCACCTACACCCACAAAACTTATGCCCTCTTTTACACGTGGCTTGTCAGATTCTCGTCGATCTAAATTAACAGCAGAAAGGCACCAGGATAACTATGCATTCCTCACTAGGTGTATCAAAGAGGATTTGGGTTTCAAAAAAAGTAAACCTGTGGCAGCTAGTATCATATACAAATGTCTTCTTCATTGGCATGCATTTGAGTCTGAGCGCACGGCCATATTTGATTACATAATTGATGGAATTAATGAAGTCATAAAAGTTAGAGATGATGACACTGTCTTGCCATATTGGTTGTCCAATACCTCCGCACTTGTGTGCCTTTTACAGAGAAATGTCCGTTCAAATGGTTTCTTAAATACCACTGGTCAACGTTATGCTGGATCATCTGGATTGACCAGCCGGATGGGGCATGCAATGAAGTCTCCATTGAAGTTAATTGGATATAATGATGGTATATCACATGTGGAGGCAAGGTATCCAGCTATGCTATTTAAGCAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGCCTAATACGTGATAATTTGAAAAAGGAACTTTCTCCACTTCTGGCATTATGTATTCAGGCACCCAAAACAGGACGGGCACAAAGTGGAAAATCATCTAGATCTCCTGGGGGGCTTCCTCAACAATCACCTGGCGGCCAATGGGACAACATCATCAATTTTTTGAATTCACTCTTGAATCAATTATGTGCGAATAATATACCATCCTTCTTCATCCGCAAGCTAGTTACACAGGTCTTTTCCTTCATCAACATGACATTGTTCAACAGTCTTCTTTTGCGGCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTAAAGTCTGGTCTTGCAGAACTGGAGAAATGGATAGTTAATGCAAATGAAGAGTATGCAGGAACATCCTGGCATGAGCTGAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATACATCAGAAGAGGAAGAAATCATTGGAAGAAATTAGGCAGGATCTTTGTCCGGCATTAACTGTGAGGCAAATCTATCGAATTAGTACTATGTATTGGGATGACAAGTATGGAACCCAGAGTGTATCCAACGAGGTAGTTGGTGAAATGAGGGAAATTGTGAGCAAAGACAATCAGAGTTTGACCTCAAATTCGTTCTTGATGGATGACGACATGAGTATTCCTTTTTCTGCTGAAGACATAGACATGGCTATCCCTGCTGTGAATACTGATGATATTGAGCTCCCAGCATTCTTGTGTGAATATCCTTGTGCCCAGTTTCTAGTTTCGCATGAGTAA 4128 0.3944 MNEGHSQSILVSGESGAGKTETTKLIMQYLTFVGGRAVCDDRSVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSKGKISGAAIRTYLLERSRVVQTTDPERNYHCFYQLCASEKDAEKYKLGHPSHFHYLNQSRVYELDGVSSAEEYIKTRKSMDIVGISHEDQEAIFRTLAAILHLGNVEFSPGKEHDSSIVKDEKSKFHLQMAANLFKCDLNLLQATLCTRSIQTREGNIVKALDCNAAVAGRDVLAKTVYARLFDWLVDKINKAVGQDINSRMQIGILDIYGFESFKDNSFEQFCINFANEKLQQHFNEHVFKMEQAEYSKEEIKWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFKHFLSHTRFGKEKFSETDFTVSHYAGKVTYHTDTFLDKNRDYVVLEHCNVLSSSKCSFVSGLFPSLPEESSRSSYKFSSVASRFKQQLQALMETLKTTEPHYIRCVKPNSLNLPQKFENTSVLHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLITPEFSDGSYDDRATTQKILQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLHTFIAHRDFISTRVAAVSLQSCCRGCLARRIYAFKRETAAAIFIQKYIRMGLTRRVYVTLYSSAIIIQSNVRGFTTRQRYLHRKEHKAATIIQAYWRMCKVRSAFKQHQFSIVAIQCLWRCKQAKKQLRRLKQEASEAGALRLAKTKLEKQLEELTWRLHLEKKLRVSNEESKQVEISKFQKALEALNYELDGAKLATINESNKNAILQNQLQLSEKEKSALERELVVMNEVRKENALMKASMDALEKKSTALEHELVNAQKDHNETIQKMREFEQKSSQLAQNMKSLEEKLLSLENENQVLRQKALTVSPKSNRPSFTKSSSEKFSRTIALNTEQSPVYESPTPTKLMPSFTRGLSDSRRSKLTAERHQDNYAFLTRCIKEDLGFKKSKPVAASIIYKCLLHWHAFESERTAIFDYIIDGINEVIKVRDDDTVLPYWLSNTSALVCLLQRNVRSNGFLNTTGQRYAGSSGLTSRMGHAMKSPLKLIGYNDGISHVEARYPAMLFKQQLTACVEKIFGLIRDNLKKELSPLLALCIQAPKTGRAQSGKSSRSPGGLPQQSPGGQWDNIINFLNSLLNQLCANNIPSFFIRKLVTQVFSFINMTLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNANEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVGEMREIVSKDNQSLTSNSFLMDDDMSIPFSAEDIDMAIPAVNTDDIELPAFLCEYPCAQFLVSHE 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01565 1375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 686 743 IPR027417 -
Vivi3g01565 1375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 637 687 IPR027417 -
Vivi3g01565 1375 Coils Coil 724 744 - -
Vivi3g01565 1375 Gene3D - 295 480 - -
Vivi3g01565 1375 CDD MyosinXI_CBD 970 1342 IPR037975 GO:0007015
Vivi3g01565 1375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 639 IPR027417 -
Vivi3g01565 1375 SMART MYSc_2a 1 590 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01565 1375 ProSiteProfiles IQ motif profile. 615 644 IPR000048 GO:0005515
Vivi3g01565 1375 Gene3D - 642 688 - -
Vivi3g01565 1375 Gene3D - 591 641 - -
Vivi3g01565 1375 Gene3D - 689 739 - -
Vivi3g01565 1375 Pfam DIL domain 1195 1298 IPR002710 -
Vivi3g01565 1375 Coils Coil 808 908 - -
Vivi3g01565 1375 ProSiteProfiles Myosin motor domain profile. 1 589 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01565 1375 SMART iq_5 710 732 IPR000048 GO:0005515
Vivi3g01565 1375 SMART iq_5 639 661 IPR000048 GO:0005515
Vivi3g01565 1375 SMART iq_5 687 709 IPR000048 GO:0005515
Vivi3g01565 1375 SMART iq_5 614 636 IPR000048 GO:0005515
Vivi3g01565 1375 SMART iq_5 662 684 IPR000048 GO:0005515
Vivi3g01565 1375 Gene3D - 523 590 - -
Vivi3g01565 1375 MobiDBLite consensus disorder prediction 1146 1165 - -
Vivi3g01565 1375 PRINTS Myosin heavy chain signature 53 80 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01565 1375 PRINTS Myosin heavy chain signature 338 366 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01565 1375 PRINTS Myosin heavy chain signature 285 313 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01565 1375 PRINTS Myosin heavy chain signature 6 31 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01565 1375 Pfam Myosin head (motor domain) 2 577 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi3g01565 1375 Gene3D Myosin VI head, motor domain, U50 subdomain 168 458 - -
Vivi3g01565 1375 FunFam Myosin heavy chain 109 163 - -
Vivi3g01565 1375 ProSiteProfiles IQ motif profile. 688 717 IPR000048 GO:0005515
Vivi3g01565 1375 ProSiteProfiles Dilute domain profile. 1019 1319 IPR002710 -
Vivi3g01565 1375 ProSiteProfiles IQ motif profile. 663 692 IPR000048 GO:0005515
Vivi3g01565 1375 Gene3D - 109 166 - -
Vivi3g01565 1375 PANTHER MYOSIN 1 1308 - -
Vivi3g01565 1375 SMART DIL_2 1194 1301 IPR002710 -
Vivi3g01565 1375 ProSiteProfiles IQ motif profile. 640 666 IPR000048 GO:0005515
Vivi3g01565 1375 Gene3D Kinesin motor domain 2 519 IPR036961 -
Vivi3g01565 1375 Pfam IQ calmodulin-binding motif 617 635 IPR000048 GO:0005515
Vivi3g01565 1375 Pfam IQ calmodulin-binding motif 641 660 IPR000048 GO:0005515
Vivi3g01565 1375 Pfam IQ calmodulin-binding motif 665 683 IPR000048 GO:0005515
Vivi3g01565 1375 Pfam IQ calmodulin-binding motif 689 709 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01565 Vivi-Chr3 25601444 25638513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01565 1 1372 Myosins gene family AT4G33200 71.720 0.0 2018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01565 K10357 - gmx:100796413 2320.04