Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01551 ATGATGCACATGACCTTCTATTGGAGCAAAAAAGTAACTCTCCTCTTCGATTCATGGAAAACCGATTCATGGACGGGTTACATCACGAGTCTACTCGCTTGTCTCATCGTCTCCATCTTCTACCAGTTGCTCGAGAATCGCCGTATTCGCCTCAAGCTCTTGGCCTCCGGGAAGCCGTTTCCGGCGCAGATCGAAGCGCCTCTTCTACGACGGACGTTCGCCGGAAGTGGAGCTAAGTTAGGCGTGAGAGTCGCCGGAGCGGTTCTGTTCGGGTTGAGCTCGGCGATCGGGTATTTCTTGATGTTGGCTGTTATGTCGTTTAACGGCGGCGTGTTTATAGCGATTGTCGTTGGTCTTGCGATTGGTTATTTGTTGTTCAGGAGTGATGGGGAAGATTCTGTTGTGGCTGATAGTTCTTGCGCATGTGCTTGA 432 0.5093 MMHMTFYWSKKVTLLFDSWKTDSWTGYITSLLACLIVSIFYQLLENRRIRLKLLASGKPFPAQIEAPLLRRTFAGSGAKLGVRVAGAVLFGLSSAIGYFLMLAVMSFNGGVFIAIVVGLAIGYLLFRSDGEDSVVADSSCACA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01551 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vivi3g01551 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01551 Vivi-Chr3 25510676 25511334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01551 1 143 Inorganic Solute Cotransporters AT5G20650 54.667 1.68e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01551 K14686 - gmx:100805457 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01551 3 25510676 25511334 Vivi7g04051 7 106988326 106990103 ECH
Vivi3g01551 3 25510676 25511334 Vivi3g01551 3 25510676 25511334 ECH