Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01549 ATGGCTTCGATTGAAACCGTCAAGTGTTACTGTTGCGGCTTAACGGAGGAGTGTACAAAGCCGTACATTGATCGTGTTAGTGAGTGTTACCATGGCCGTTGGATTTGCGGTTTATGCGTAGAGGCTGTGAAAGAAGAAACGATGAAATCGCAGAAAGATATTAGCACTGATGAAGCGGTTAAGCGGCACATGAATTTCAGAGCTTTAACTTCGAGTCCTCCTGAAAAATCTGATATCGATTTGATTCTTGCTGTGAAACATCTTATCTTTAGGTCGTTGGATTCGCCGAGGAAAGAAGGTTTGAGTTTTGGTAGATCGCGGAGGTGTTTTTCTACAGTGAATGGAGTGAATGGAGGAACAACACAGGGAGTGAAAGAGGGAGAGACAAGTTAG 393 0.4377 MASIETVKCYCCGLTEECTKPYIDRVSECYHGRWICGLCVEAVKEETMKSQKDISTDEAVKRHMNFRALTSSPPEKSDIDLILAVKHLIFRSLDSPRKEGLSFGRSRRCFSTVNGVNGGTTQGVKEGETS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01549 130 PANTHER OS01G0745000 PROTEIN 3 114 IPR012876 -
Vivi3g01549 130 Pfam Protein of unknown function (DUF1677) 4 91 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01549 Vivi-Chr3 25497418 25498292 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01549 - - psat:127087844 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01549 3 25497418 25498292 Vivi3g01549 3 25497418 25498292 ECH
Vivi1g00805 1 17335836 17336576 Vivi3g01549 3 25497418 25498292 ECH
Vivi7g04051 7 106988326 106990103 Vivi3g01549 3 25497418 25498292 ECH