Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01525 ATGAGAACCATAGCAGCAGCTTCAACTAGTTACTCTTTTTCACCATATTCATCGCCTTCAATCTCATCTCATTCATCGTGGCATTCGCCGATTCCTTATCTCTTTGGAGGCCTAGCAGCGATGCTAGGCCTTATAGCTTTCGCTCTCTTGATTCTAGCTTGCTCTTATTGGAGACTCACCGGTCAATTACAAGACGAAGAGAACAATAACAGAAACAGTGAAAAAGAAGGTGATAGTTTAAATGAAAAATCTGTTAAAGTTTATGAAGAGAAATTTCTTGTCATTATGGCTGGTGATCAGAACCCTACGTTTTTGGCTACGCCTGTTTTTCCTAAATCGTTTTCTGTTATGGATCTGAATTCCGATGAAATGCTTCGGAATCATGAAGCGGTTGAGAAAACGGAAAAGGAAACGGAAACGGAAACGGAAGTTTCAGAAGAACGGAATCAGAATCAGCAACAACAGTGA 468 0.4038 MRTIAAASTSYSFSPYSSPSISSHSSWHSPIPYLFGGLAAMLGLIAFALLILACSYWRLTGQLQDEENNNRNSEKEGDSLNEKSVKVYEEKFLVIMAGDQNPTFLATPVFPKSFSVMDLNSDEMLRNHEAVEKTEKETETETEVSEERNQNQQQQ 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01525 155 Coils Coil 56 83 - -
Vivi3g01525 155 MobiDBLite consensus disorder prediction 126 146 - -
Vivi3g01525 155 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 9 152 IPR040359 GO:0080143
Vivi3g01525 155 MobiDBLite consensus disorder prediction 126 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01525 Vivi-Chr3 24971101 24971885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01525 24 108 Glutamine Dumper (GDU) Family AT5G57685 68.539 2.32e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01525 - - cam:101490824 151.369