Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01523 ATGGGATATCTCAATTCAGTTTTGTCCTCTTCAAGTCAGGTTCATTCTATGGATGATGCACCTGTTAGCGGTGGTGGTCTCAGTCACAATGGAAAATTCAGCTATGGGTATGCTAGCTCGCCCGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTAGATGGTGAAATCGTTGGCCTTTTCGGAGTCTTTGATGGTCATGGTGGTATTCGTGCGGCTGAGTATGTTAAGAAAAACCTGTTTAGTAATTTGATCAGTCACCCGAAATTTATTTCTGACACCAAATCTGCAATATCTGATGCATATAATCATACTGATTCGGAATATCTGAAATCAGAAAACAATCATCACAAAGATGCAGGATCTACTGCGTCTACCGCCATTCTCGTTGGTGATCGTTTGCTTGTTGCAAATGTTGGAGACTCCAGGGCCGTTATATGCAGGGGTGGTACTGCATTTGCTGTTTCTCGAGATCATAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGCGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCTGAAATCCAGGAAGAAAAAGTTGACAGTTCTCTCGAGTTTCTTATTCTGGCCAGTGATGGGCTATGGGACGTTGTCACAAACGAGGAAGCCGTTGCTATGATTAAACCACTTGAGGATGCAGAGGAGGCGGCAAAGAGACTGATGCAAGAAGCATATCAGAGAGGCAGCGCCGACAATATCACTTGTGTTGTTGTTCGTTTCTTGATGAACCAAGGCTCCTCTTCTCATACTAACTCCGTAATTAACCGTCCTTAG 894 0.4396 MGYLNSVLSSSSQVHSMDDAPVSGGGLSHNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGIRAAEYVKKNLFSNLISHPKFISDTKSAISDAYNHTDSEYLKSENNHHKDAGSTASTAILVGDRLLVANVGDSRAVICRGGTAFAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVTNEEAVAMIKPLEDAEEAAKRLMQEAYQRGSADNITCVVVRFLMNQGSSSHTNSVINRP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01523 297 MobiDBLite consensus disorder prediction 1 21 - -
Vivi3g01523 297 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Vivi3g01523 297 PANTHER PROTEIN PHOSPHATASE 23 279 IPR015655 GO:0004722|GO:0006470
Vivi3g01523 297 CDD PP2Cc 33 280 IPR001932 -
Vivi3g01523 297 Gene3D - 26 285 IPR036457 -
Vivi3g01523 297 MobiDBLite consensus disorder prediction 1 18 - -
Vivi3g01523 297 SUPERFAMILY PP2C-like 29 280 IPR036457 -
Vivi3g01523 297 SMART PP2C_SIG_2 29 280 IPR001932 -
Vivi3g01523 297 FunFam probable protein phosphatase 2C 59 26 284 - -
Vivi3g01523 297 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Vivi3g01523 297 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Vivi3g01523 297 SMART PP2C_4 24 278 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01523 Vivi-Chr3 24918783 24921658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01523 1 295 PP2C-type Phosphatase Gene Family AT4G31750 87.248 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01523 K17506 - gmx:547661 533.102