Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01519 ATGAAGATAGCAATAGAAGGATGCATGCATGGCGATCTCGACAATGTCTACAAAACCCTCCAACACCTCGAAAAATCTCACAACACCAAAATCGACCTCCTCCTTTGTTGCGGCGATTTTCAGGCCGTGCGTAACGAGAACGATTTGAATAGCCTAGCCGTACCAGAGAAATACCGTACCATGAATTCCTTCTGGAAATACTATTCCGGGTTGCAGGTTGCTCCGTATCCCACAATCTTCATTGGTGGTAACCACGAAGCTTCCAATTATCTTTGGGAACTGTATTATGGAGGATGGGCTGCACCTAACATATACTTTTTGGGAGCGGCTGGTGTGGTTAAGTTTGGGAATATACGAATTGGCGGGCTCTCGGGAATTTATAAGCATTTTGATTATAAATCAGGGCACTATGAGAGGCCTCCTTATGATAAAAATACTATTAGGTCTGCGTATCATGTTCGAGAGTACGATGTTCGCAAACTCATGCAAGTTGAGGAACCTATTGATATTTTTCTATCACATGATTGGCCGGTGAGGATCACTGATCATGGGGATTGCGAGGCGCTTCTACGGAGGAAGCCTTTCTTTAGGGAAGAGATAGAGGGAAATAGACTTGGGAGTAAAGCTGCTGCCCAACTTCTAGAAAAATTGAAACCGCAATTCTGGTTTTCGGCACACTTACACTGCAAGTTTGCTGCTGTTGTTCAGCATGGGGAAGGAGGTCCTGTGACAAAATTCTTAGCGCTTGATAAATGTCTTCCTGGGCGTGATTTCTTACAGGTTGTTGAAATTGAATCAGAGGCAGGACCTTATGAGATTCAGATTGATGAAGAATGGTTAGCAATAACACGGATGTTCAACAATGTATTCCCTTTGACGCCCAAAGGTGCAGATTTTCGAGGTGTAAATCTTGAAATGGAAGACTGTCGCAAGTGGGTTAGAAGCAAGCTACAAGAATGGGGTTGTAAACCTTCTGAGTTTGTTAGAACAGTTCCATGTTATGATCCTTCTCAAGCCGGTGTTGATGGTGCTTCTGCTGTTAATCCTCGGAATCCTCAGACAGAATATCTTTTGCGACTTCTGGAACTTCCATATCTTCTTGATAGAAATCCCGAAGCAAAGGACATGTCATCTTATCCTTCTTTAATTCCAAGAGGCCCTTGTGATAACTATAGCGAGGACATTCCCATTGACGACGTGGATGATGACGATGATGAGGGATTTGCTACAATTTTTGGCATTGGTTCTATTTTGAGGTCTGCCCTTATATCCAAAAATCAGATACCAGCTCAATGTGCTTTGGAAACACAGAGTAGTAAAATATTCTGCACACTGCCCTTCAGGCACTGCTTTGAACCCTCAAAAAAGTACCTAACGTCTGGTTCTATGGAGACAACAAAATCAATGTTTCTTTCCATGCTAGTTTCTTTTATTTTTATATTTTGTTGTTATGTTTCATCTGTTAAGGCTGCTCTCTCTTTCGGCTTTTATGCTGATTCATGTCCGAATGCAGAATTGATGATAAGAAATACAGTTAGTTCAGCTTCTTCTAATGATCCTTCCGTTCCAGGGAAGCTCCTTCGCTTGGTTTTTCATGATTGTTTCGTTGAGGGATGTGATGCATCTTTGATGCTACAAGGGAACAATACAGAACAAAGTGATCCAGCAAACAGGTCTGTTGGAGGATTTTCTGTTATAGAATCAGCAAAAAGACTTCTTGAGATCTTCTGCCCTGGAACTGTTTCTTGTGCAGACATAATCGCTTTAGCAGCCAGAGATGCAGTCGAAATTGCTGGAGGACCGAGGGTTCAGATTCCTACAGGTAGAAGAGATGGAATGGTTTCGATTGTTTCAAATGTTAGACCAAACATTGTGGACACTAGTTTTACTATGGATGAGATGGTTAAGCTCTTTTCCACCAAAGGATTGTCCTTACTCGATCTCGTCATTCTTTCAGGAGCTCATACAATAGGATCAGCTCATTGCAACACATTCAGGTCGCGGTTCCAACAAGACTCGAATGGAACTCTTAGGCTCGTCGACCAAACCATTGATACTGATTACGCTGACGAGCTAATGAAACAGTGTCCAGTAACTGCACAACCATCCGTGACAGTGAACAATGATCCTGAAACATCTATGCTATTTGACAACCAGTACTACAGAAATCTTCTAGCTCACAGAGTTCTGTTCCCGTCTGATTCAGTTTTGTTGACCGATGTTAACACGAAGAAAATGGTGGAGGATTTTGCAAATGATCAACAACTTTTCTTTGTCAATTGGGGTGCTGCGTTCGTGAAACTAACTAGCGTTGGCGTTAAGACTGACGAGGAGGGCGAAATTCGTCGTTCTTGTACAGCAACTAATGTTGTATAA 2376 0.4234 MKIAIEGCMHGDLDNVYKTLQHLEKSHNTKIDLLLCCGDFQAVRNENDLNSLAVPEKYRTMNSFWKYYSGLQVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGAAGVVKFGNIRIGGLSGIYKHFDYKSGHYERPPYDKNTIRSAYHVREYDVRKLMQVEEPIDIFLSHDWPVRITDHGDCEALLRRKPFFREEIEGNRLGSKAAAQLLEKLKPQFWFSAHLHCKFAAVVQHGEGGPVTKFLALDKCLPGRDFLQVVEIESEAGPYEIQIDEEWLAITRMFNNVFPLTPKGADFRGVNLEMEDCRKWVRSKLQEWGCKPSEFVRTVPCYDPSQAGVDGASAVNPRNPQTEYLLRLLELPYLLDRNPEAKDMSSYPSLIPRGPCDNYSEDIPIDDVDDDDDEGFATIFGIGSILRSALISKNQIPAQCALETQSSKIFCTLPFRHCFEPSKKYLTSGSMETTKSMFLSMLVSFIFIFCCYVSSVKAALSFGFYADSCPNAELMIRNTVSSASSNDPSVPGKLLRLVFHDCFVEGCDASLMLQGNNTEQSDPANRSVGGFSVIESAKRLLEIFCPGTVSCADIIALAARDAVEIAGGPRVQIPTGRRDGMVSIVSNVRPNIVDTSFTMDEMVKLFSTKGLSLLDLVILSGAHTIGSAHCNTFRSRFQQDSNGTLRLVDQTIDTDYADELMKQCPVTAQPSVTVNNDPETSMLFDNQYYRNLLAHRVLFPSDSVLLTDVNTKKMVEDFANDQQLFFVNWGAAFVKLTSVGVKTDEEGEIRRSCTATNVV 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01519 791 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Vivi3g01519 791 SUPERFAMILY Metallo-dependent phosphatases 1 253 IPR029052 -
Vivi3g01519 791 Gene3D - 4 235 IPR029052 -
Vivi3g01519 791 Gene3D - 495 789 - -
Vivi3g01519 791 ProSiteProfiles Plant heme peroxidase family profile. 491 789 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 Pfam Peroxidase 509 753 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 CDD secretory_peroxidase 492 788 IPR033905 GO:0004601|GO:0042744
Vivi3g01519 791 PRINTS Plant peroxidase signature 525 545 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Plant peroxidase signature 723 740 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Plant peroxidase signature 707 722 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Plant peroxidase signature 599 614 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Plant peroxidase signature 646 658 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Plant peroxidase signature 763 776 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Plant peroxidase signature 561 574 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Plant peroxidase signature 580 590 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Plant peroxidase signature 501 520 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 FunFam Lariat debranching enzyme 9 251 - -
Vivi3g01519 791 CDD MPP_Dbr1_N 3 259 IPR041816 -
Vivi3g01519 791 PRINTS Haem peroxidase superfamily signature 581 598 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Haem peroxidase superfamily signature 647 662 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Haem peroxidase superfamily signature 523 537 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Haem peroxidase superfamily signature 599 611 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 PRINTS Haem peroxidase superfamily signature 709 724 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 ProSitePatterns Peroxidases proximal heme-ligand signature. 647 657 IPR019793 -
Vivi3g01519 791 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 403 - -
Vivi3g01519 791 Pfam Lariat debranching enzyme, C-terminal domain 243 364 IPR007708 GO:0006397|GO:0016788
Vivi3g01519 791 FunFam Peroxidase 625 768 - -
Vivi3g01519 791 FunFam Peroxidase 495 636 - -
Vivi3g01519 791 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Vivi3g01519 791 SUPERFAMILY Heme-dependent peroxidases 492 789 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi3g01519 791 Gene3D Peroxidase, domain 2 625 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01519 Vivi-Chr3 24851426 24858895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01519 478 789 Peroxidase AT4G31760 59.615 5.49e-138 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01519 K18328 - cave:132189503 1032.71