Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01507 ATGGGGATATATCTCAGCACTCCCAAAACTGAGAAATTTTCTGAAGATGGAGAGAGTGATAATCTTAGATATGGTTTATCGTCCATGCAAGGATGGCGTGCAACAATGGAAGATGCTCATGCTGCGTATACTGATCTGGATGAGTCTACTTCGTTTTTCGGTGTTTATGACGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTAAGTTTCTTCACCAACAGATGCTTAAAAGTGAAGCATACTTAGTTGGAGATATTGGAACCTCTCTTCAAGAATCATTTTTAAGAATGGATGAGATGATGCGTGGTCAGAGAGGATGGAGGGAGCTATCAATCTTGGGAGATAAGATAAACAAGTTTACTGGGATGATAGAAGGGCTGATTTGGTCTCCACGAAGCAGCAATGGTATTAGCAGAGTTGATGATTGGGCTTGTGAGGAGGTAGGTCCGACATTCGAGGATAGTTTAATACTCGGGCCTCATTCTGATTTTGCTGGACCAACTTCAGGAAGCACAGCCTGTGTTGCAGTTATTAGAAACAACCAACTTCTTGTCGCAAATGCTGGTGATTCACGTTGTGTAATATCTCGGAAGGGACAGGCATACAATTTGTCTATAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATTTCGAAAGCTGGTGGTTTTATTCATGCCGGAAGAGTAAATGGCAGTTTAAACCTTACAAGAGCTATTGGTGACATGGAATTTAAACAGAACAAATTTCTTCCTGCTGAAAAACAAGTTGTAACTGCCAATCCAGATATTAACACTGTTGAACTTTGTGATGAAGATGAATTTATGGTTCTAGCTTGTGATGGCATATGGGACTGCTTGTCAAGTCAACAATTGGTAGATTTTGTTCATGAACAACTGCGTTCGGAAACAAAACTGTCTGCTGTGTGCGAAAGAGTGTTTGACCGGTGTTTGGCACCATCAACTGCTGGTGGCGAAGGATGTGATAACATGACTATGATCTTGGTCCAGTTCAAAAAACCTGCTTAG 1035 0.4145 MGIYLSTPKTEKFSEDGESDNLRYGLSSMQGWRATMEDAHAAYTDLDESTSFFGVYDGHGGKVVAKFCAKFLHQQMLKSEAYLVGDIGTSLQESFLRMDEMMRGQRGWRELSILGDKINKFTGMIEGLIWSPRSSNGISRVDDWACEEVGPTFEDSLILGPHSDFAGPTSGSTACVAVIRNNQLLVANAGDSRCVISRKGQAYNLSIDHKPDLEIEKERISKAGGFIHAGRVNGSLNLTRAIGDMEFKQNKFLPAEKQVVTANPDINTVELCDEDEFMVLACDGIWDCLSSQQLVDFVHEQLRSETKLSAVCERVFDRCLAPSTAGGEGCDNMTMILVQFKKPA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01507 344 SUPERFAMILY PP2C-like 3 341 IPR036457 -
Vivi3g01507 344 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Vivi3g01507 344 Gene3D - 1 341 IPR036457 -
Vivi3g01507 344 ProSiteProfiles PPM-type phosphatase domain profile. 23 340 IPR001932 -
Vivi3g01507 344 CDD PP2Cc 23 340 IPR001932 -
Vivi3g01507 344 Pfam Protein phosphatase 2C 168 324 IPR001932 -
Vivi3g01507 344 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Vivi3g01507 344 SMART PP2C_4 13 338 IPR001932 -
Vivi3g01507 344 SMART PP2C_SIG_2 28 340 IPR001932 -
Vivi3g01507 344 PANTHER PROTEIN PHOSPHATASE 2C 20 339 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01507 Vivi-Chr3 24752832 24756756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01507 1 343 PP2C-type Phosphatase Gene Family AT2G25070 75.510 0.0 563