Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01474 ATGAAGATAGCAATAGAAGGATGCATGCATGGCGATCTCGACAATGTCTACAAAACCCTCCAACACCTCGAAAAATCCCACAACACCAAAATCGATCTCCTCCTCTGTTGCGGCGATTTTCAGGCCGTGCGTAACGAGAACGATTTGAATAGCCTAGCCGTACCAGAGAAATACCGTACCATGAATTCCTTCTGGAAGTACTATTCTGGTTTGCAGGTTGCTCCGTATCCCACAATCTTCATTGGTGGCAACCACGAAGCTTCCAATTATCTATGGGAACTGTATTATGGAGGATGGGCTGCACCTAACATATACTTTTTGGGAGCGGCTGGTGTTGTTAAGTTTGGGAATATACGAATTGGCGGGCTCTCGGGAATTTATAAGCATTTTGATTATAAATCAGGGCACTATGAGAGGCCTCCTTATGATAAAAATACTATTAGGTCTGCGTATCATGTTCGAGAGTATGATGTTCGCAAACTCATGCAAGTTGAGGAACCTATTGATATTTTTCTATCACATGATTGGCCGGTGAGGATCACTGATCATGGGGATTGCGAGGCACTTCTACGGAGGAAACCTTTCTTTAGGGAAGAGATAGAGGGAAATAGACTTGGGAGTAAAGCTGCTGCCCAACTTCTAGAAAAATTGAAACCACAATTCTGGTTTTCGGCACACTTACACTGCAAGTTTGCTGCTGTTGTTCAGCATGGGGAAGGAGGTCCTGTGACAAAATTCTTAGCACTTGATAAATGTCTTCCTGGACGTGATTTCTTACAGGTTGTTGAAATTGAATCAGAGGCAGGACCTTATGAGATTCAGTTTGATGAAGAATGGTTAGCAATAACACGGATGTTCAACAATGTATTCCCTTTGACGCCCAAAGGTGCAGATTTTCGAGGTGTAAATCTTGAAATGGAAGATTGTCGCAAGTGGGTTAGAAGCAAGCTACAAGAATGGGGTTGTAAACCTTCTGAGTTTGTTAGAACAGTTCCATGTTATGATCCTTCTCAAGCCGGTGTTGATGGTGCTTCTGCTGTCAATCCTCGGAATCCTCAGACAGAATATCTTTTGCGACTTCTGGAACTTCCATATCTTCTTGATAGAAATCCCGAAGCAAAGGACATGTCATCTTATCCTTCTTTAATTCCAAGAGGCCCTTGTGATAACTATAGCGAGGACATTCCCATTGACGACGTGGATGATGACGATGATGAGGGATTTGCTACAATTTTTGGCATTGGTTCTATTTTGAGGTCTGCCCTAATATCCAAAAATCAGATACCAGCTCAATGTGCTTTGGAAACACAGCTAGTCAAGAGTAGTAAAATATTCTGCACACTGCCCTTCAGGCACTGCTTTGAACCCTCAAAAAAGTACCTAACGTCTGGTTCTATGGAGACAACAAAATCAATGTTTCTTTCCATGCTAGTTTCTTTTATTTTTATATTTTGTTGTTATGTTTCATCTGTTAAGGCTGCTCTCTCTTTCGGCTTTTATGCTGATTCATGTCCGAATGCAGAATTGATGATAAGAAATACAGTTAGTTCAGCTTCTTCTAATGACCCCTCCGTTCCGGGGAAGCTCCTTCGCTTGGTTTTTCATGATTGTTTTGTTGAGGGATGTGATGCATCTTTGATGCTACAAGGGAACAATACAGAACAAAGTGATCCAGCAAACAGGTCTGTTGGAGGATTTTCTGTTATAGAATCAGCAAAAAGACTTCTTGAGATCTTCTGCCCTGGAACTGTTTCTTGTGCAGACATAATCGCTTTAGCAGCCAGAGATGCAGTCGAAATTGCTGGAGGACCGAGGGTTCAGATTCCTACAGGTAGAAGAGATGGAATGGTTTCGATTGTTTCAAATGTTAGACCAAACATTGTGGACACTAGTTTTACTATGGATGAGATGGTTAAGCTCTTTTCCACCAAAGGATTGTCCTTACTCGATCTCGTCATTCTTTCAGGAGCTCATACAATAGGATCAGCTCATTGCAACACATTCAGGTCGCGGTTCCAACAAGACTCAAATGGAACTCTTAGGCTCGTCGACCAAACCATTGATACTGATTACGCTGACGAGCTAATGAAACAGTGTCCAGTAACTGCCCAACCATCCGTGACAGTGAACAATGATCCTGAAACATCTATGCTATTTGACAACCAGTACTACAGAAATCTTCTAGCTCACCGAGTTCTGTTCCCGTCTGATTCAGTTTTGTTGACCGACGTTAACACGAAGAAAATGGTGGAGGATTTTGCAAATGATCAACAACTTTTCTTTGTCAATTGGGGCGCTGCGTTCGTGAAACTAACTAGCGTTGGCGTTAAGACTGATGAGGAGGGCGAAATTCGTCGTTCTTGTACAGCAACTAATGTTGTATAA 2385 0.4226 MKIAIEGCMHGDLDNVYKTLQHLEKSHNTKIDLLLCCGDFQAVRNENDLNSLAVPEKYRTMNSFWKYYSGLQVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGAAGVVKFGNIRIGGLSGIYKHFDYKSGHYERPPYDKNTIRSAYHVREYDVRKLMQVEEPIDIFLSHDWPVRITDHGDCEALLRRKPFFREEIEGNRLGSKAAAQLLEKLKPQFWFSAHLHCKFAAVVQHGEGGPVTKFLALDKCLPGRDFLQVVEIESEAGPYEIQFDEEWLAITRMFNNVFPLTPKGADFRGVNLEMEDCRKWVRSKLQEWGCKPSEFVRTVPCYDPSQAGVDGASAVNPRNPQTEYLLRLLELPYLLDRNPEAKDMSSYPSLIPRGPCDNYSEDIPIDDVDDDDDEGFATIFGIGSILRSALISKNQIPAQCALETQLVKSSKIFCTLPFRHCFEPSKKYLTSGSMETTKSMFLSMLVSFIFIFCCYVSSVKAALSFGFYADSCPNAELMIRNTVSSASSNDPSVPGKLLRLVFHDCFVEGCDASLMLQGNNTEQSDPANRSVGGFSVIESAKRLLEIFCPGTVSCADIIALAARDAVEIAGGPRVQIPTGRRDGMVSIVSNVRPNIVDTSFTMDEMVKLFSTKGLSLLDLVILSGAHTIGSAHCNTFRSRFQQDSNGTLRLVDQTIDTDYADELMKQCPVTAQPSVTVNNDPETSMLFDNQYYRNLLAHRVLFPSDSVLLTDVNTKKMVEDFANDQQLFFVNWGAAFVKLTSVGVKTDEEGEIRRSCTATNVV 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01474 794 Gene3D Peroxidase, domain 2 628 771 - -
Vivi3g01474 794 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 403 - -
Vivi3g01474 794 Gene3D - 4 235 IPR029052 -
Vivi3g01474 794 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Vivi3g01474 794 CDD secretory_peroxidase 495 791 IPR033905 GO:0004601|GO:0042744
Vivi3g01474 794 Pfam Peroxidase 512 756 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 ProSitePatterns Peroxidases proximal heme-ligand signature. 650 660 IPR019793 -
Vivi3g01474 794 Pfam Lariat debranching enzyme, C-terminal domain 243 364 IPR007708 GO:0006397|GO:0016788
Vivi3g01474 794 PRINTS Haem peroxidase superfamily signature 584 601 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Haem peroxidase superfamily signature 526 540 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Haem peroxidase superfamily signature 650 665 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Haem peroxidase superfamily signature 712 727 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Haem peroxidase superfamily signature 602 614 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 FunFam Peroxidase 628 771 - -
Vivi3g01474 794 FunFam Lariat debranching enzyme 9 251 - -
Vivi3g01474 794 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Vivi3g01474 794 CDD MPP_Dbr1_N 3 259 IPR041816 -
Vivi3g01474 794 SUPERFAMILY Metallo-dependent phosphatases 1 253 IPR029052 -
Vivi3g01474 794 PRINTS Plant peroxidase signature 710 725 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Plant peroxidase signature 504 523 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Plant peroxidase signature 528 548 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Plant peroxidase signature 649 661 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Plant peroxidase signature 583 593 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Plant peroxidase signature 602 617 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Plant peroxidase signature 726 743 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Plant peroxidase signature 766 779 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 PRINTS Plant peroxidase signature 564 577 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 Gene3D - 498 792 - -
Vivi3g01474 794 FunFam Peroxidase 498 639 - -
Vivi3g01474 794 ProSiteProfiles Plant heme peroxidase family profile. 494 792 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01474 794 SUPERFAMILY Heme-dependent peroxidases 495 792 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01474 Vivi-Chr3 24350802 24358513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01474 481 792 Peroxidase AT4G31760 59.615 6.79e-138 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01474 K18328 - cave:132189503 1033.86